Gene Expression Data
Assay Details
Assay
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Reference:
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J:30903
Krasnoshtein F, et al., Developmental expression of the Fac gene correlates with congenital defects in Fanconi anemia patients. Hum Mol Genet. 1996 Jan;5(1):85-93
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5766629
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Gene symbol:
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Fancc
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Gene name:
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Fanconi anemia, complementation group C
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Probe:
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2BX
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Assay notes:
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It is possible that another probe (6EH, MGI:16095) has been used. Though the 2BX gave a somewhat better signal, no significant differences were observed between the results obtained with the two probes.
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|
Results
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Specimen
1A/B:
embryonic day 9.0
(more )
Specimen
1A/B:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1D/E:
embryonic day 10.0
(more )
Specimen
1D/E:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: limb mesenchyme |
Present |
Regionally restricted |
1D/E
|
Limited to undifferentiated mesenchyme, presumably in those cells that give rise to skeletal tissues.
|
Specimen
1G/H:
embryonic day 11.0
(more )
Specimen
1G/H:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: tail mesenchyme |
Present |
Regionally restricted |
1G/H
|
Limited to undifferentiated mesenchyme, presumably in those cells that give rise to skeletal tissues.
|
Specimen
1J/K:
embryonic day 13.0
(more )
Specimen
1J/K:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1M/N:
embryonic day 15.0
(more )
Specimen
1M/N:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 15.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2A/B:
embryonic day 14.0
(more )
Specimen
2A/B:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2D/E:
embryonic day 16.0
(more )
Specimen
2D/E:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 16.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: basioccipital bone |
Present |
Regionally restricted |
2D/E
|
Expressed in the occipital bone, in the periosteum and at the site of osteogenesis in the zone of endochondral ossification.
|
Specimen
2G/H:
embryonic day 13.0
(more )
Specimen
2G/H:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
3A/B:
embryonic day 16.0
(more )
Specimen
3A/B:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 16.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: femur |
Moderate |
Regionally restricted |
3A/B
|
Expressed in the zone of endochondral ossification. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
Specimen
3D/E:
embryonic day 16.0
(more )
Specimen
3D/E:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 16.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: fibula |
Moderate |
Regionally restricted |
3D/E
|
Expressed in the zone of endochondral ossification. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS24: tibia |
Moderate |
Regionally restricted |
3D/E
|
Expressed in the zone of endochondral ossification. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
Specimen
3G/H:
postnatal newborn
(more )
Specimen
3G/H:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
postnatal newborn
|
Age Note:
|
also referred to as E19.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4A:
postnatal newborn
(more )
Specimen
4A:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
postnatal newborn
|
Age Note:
|
also referred to as E19.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: long bone |
Present |
Regionally restricted |
4A
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Expressed in osteogenic cells.
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Specimen
4C:
postnatal newborn
(more )
Specimen
4C:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
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Age:
|
postnatal newborn
|
Age Note:
|
also referred to as E19.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: long bone |
Present |
Regionally restricted |
4C
|
Expressed in hematopoietic cells.
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Specimen
5A/B:
embryonic day 9.0
(more )
Specimen
5A/B:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: future brain |
Present |
Regionally restricted |
5A/B
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Expressed in the ependymal cell layer.
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Specimen
5D/E:
embryonic day 11.0
(more )
Specimen
5D/E:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: brain |
Present |
Regionally restricted |
5D/E
|
Expressed in the ependymal cell layer.
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Specimen
6A/B:
embryonic day 11.0
(more )
Specimen
6A/B:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: head mesenchyme |
Strong |
Regionally restricted |
6A/B
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Expressed in differentiating cells of the frontonasal mesenchyme.
|
Specimen
6D/E:
embryonic day 16.0
(more )
Specimen
6D/E:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 16.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: vibrissa follicle |
Present |
Regionally restricted |
6D/E
|
Expressed in the outer root sheath.
|
Specimen
6G/H:
postnatal newborn
(more )
Specimen
6G/H:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
postnatal newborn
|
Age Note:
|
also referred to as E19.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: vibrissa follicle |
Present |
Regionally restricted |
6G/H
|
Expressed in the outer root sheath.
|
Specimen
not shown:
embryonic day 8.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 10.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: organ system |
Present |
Regionally restricted |
|
Expressed in the mesenchyme of the craniofacial region at the site of future whisker follicles.
|
TS16: 1st branchial arch mandibular component |
Moderate |
Regionally restricted |
|
Expressed in the mandible.
|
TS16: head mesenchyme |
Strong |
Regionally restricted |
|
Expressed in differentiating cells of the frontonasal mesenchyme and in the mesenchyme of the craniofacial region at the site of future whisker follicles.
|
Specimen
not shown:
embryonic day 11.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 12.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 12.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: tail paraxial mesenchyme |
Present |
Regionally restricted |
|
Limited to undifferentiated mesenchyme, presumably in those cells that give rise to skeletal tissues.
|
Specimen
not shown:
embryonic day 13.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 14.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 14.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 15.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 15.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: ilium |
Present |
Regionally restricted |
|
Expressed in cells of the inner perichondrium.
|
TS23: scapula |
Present |
Regionally restricted |
|
Expressed in cells of the inner perichondrium.
|
TS23: cranium |
Moderate |
Regionally restricted |
|
Expressed in the temporal bone region.
|
TS23: vibrissa follicle |
Present |
Regionally restricted |
|
Expressed in the outer root sheath.
|
Specimen
not shown:
embryonic day 16.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 16.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: ilium |
Present |
Regionally restricted |
|
Expressed in the periosteum and the zone of endochondral ossification.
|
TS24: scapula |
Present |
Regionally restricted |
|
Expressed in the periosteum and the zone of endochondral ossification.
|
TS24: spinal cord |
Present |
Regionally restricted |
|
Expressed in the mesenchyme.
|
TS24: brain |
Present |
Regionally restricted |
|
Expressed in the ependymal cell layer.
|
Specimen
not shown:
embryonic day 17.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
postnatal newborn
(more )
Specimen
not shown:
(close )
Genetic Background:
|
either: C57BL/6J or NIH Swiss
|
Age:
|
postnatal newborn
|
Age Note:
|
also referred to as E19.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: metanephros |
Present |
Regionally restricted |
|
Expressed in the mesenchyme. Expression becomes less abundant as embryogenesis progresses.
|
TS27: clavicle |
Present |
|
|
|
TS27: mandible |
Present |
|
|
|
TS27: occipital bone |
Present |
|
|
|
TS27: rib |
Present |
|
|
|
TS27: sphenoid bone |
Present |
|
|
|
TS27: vertebra |
Present |
|
|
|
TS27: ilium |
Present |
Regionally restricted |
|
Expressed in the periosteum and the zone of endochondral ossification. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: scapula |
Present |
Regionally restricted |
|
Expressed in the periosteum and the zone of endochondral ossification. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: femur |
Moderate |
Regionally restricted |
|
Expressed in the inner periosteum and the osteogenic diaphysis. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: fibula |
Moderate |
Regionally restricted |
|
Expressed in the inner periosteum and the osteogenic diaphysis. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: humerus |
Moderate |
Regionally restricted |
|
Expressed in the inner periosteum and the osteogenic diaphysis. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: radius |
Moderate |
Regionally restricted |
|
Expressed in the inner periosteum and the osteogenic diaphysis. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: tibia |
Moderate |
Regionally restricted |
|
Expressed in the inner periosteum and the osteogenic diaphysis. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
TS27: ulna |
Moderate |
Regionally restricted |
|
Expressed in the inner periosteum and the osteogenic diaphysis. Expressed by neither the proliferating nor the hypertrophic chondrocytes.
|
|