Gene Expression Data
Assay Details
Assay
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Reference:
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J:85879
Nakagawa Y, et al., Dynamic patterned expression of orphan nuclear receptor genes RORalpha and RORbeta in developing mouse forebrain. Dev Neurosci. 2003 Mar-Aug;25(2-4):234-44
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5693265
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Gene symbol:
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Rorb
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Gene name:
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RAR-related orphan receptor beta
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Probe:
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Rorbeta cDNA2
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
1D:
embryonic day 17.5
(more )
Note: Rostral dorsal thalamus.
Specimen
1D:
(close )
Genetic Background:
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ICR
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Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
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Note:
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Rostral dorsal thalamus.
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: thalamus |
Present |
Regionally restricted |
1D
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Low expression in the ventroposterior, posterior and mediodorsal nuclei, and moderate expression in the medial geniculate nucleus. No expression in the dorsal lateral geniculate nucleus. High expression in the centromedial nuclei.
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Specimen
1E:
embryonic day 17.5
(more )
Note: Caudal dorsal thalamus.
Specimen
1E:
(close )
Genetic Background:
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ICR
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Cryosection
|
Note:
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Caudal dorsal thalamus.
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: thalamus |
Present |
Regionally restricted |
1E
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Low expression in the ventroposterior, posterior and mediodorsal nuclei, and moderate expression in the medial geniculate nucleus. No expression in the dorsal lateral geniculate nucleus. High expression in the centromedial nuclei.
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Specimen
1F:
postnatal day 2
(more )
Note: Rostral dorsal thalamus.
Specimen
1F:
(close )
Genetic Background:
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ICR
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Age:
|
postnatal day 2
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
|
Note:
|
Rostral dorsal thalamus.
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Specimen
2B:
embryonic day 11.5
(more )
Specimen
2B:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Specimen
2E:
embryonic day 12.5
(more )
Specimen
2E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Specimen
3A:
embryonic day 12.5
(more )
Specimen
3A:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 12.5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
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Specimen
3B:
embryonic day 14.5
(more )
Specimen
3B:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 14.5
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Sex:
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Not Specified
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Type:
|
section
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS22: neocortex |
Present |
Regionally restricted |
3B
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Expressed in the emerging cortical plate in the lateral part of neocortex at a rostral level.
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TS22: ganglionic eminence |
Present |
|
3B
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Specimen
3C:
embryonic day 16.5
(more )
Specimen
3C:
(close )
Genetic Background:
|
ICR
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Age:
|
embryonic day 16.5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: neocortex |
Present |
Regionally restricted |
3C
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Expressed in cortical plate. Expression is much higher at rostral levels than at caudal levels. High lateral to low medial gradient.
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Specimen
3D:
embryonic day 16.5
(more )
Specimen
3D:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: neocortex |
Present |
Regionally restricted |
3D
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Expressed in cortical plate. Expression is much higher at rostral levels than at caudal levels.
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Specimen
3E:
embryonic day 16.5
(more )
Specimen
3E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
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Type:
|
section
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: neocortex |
Present |
Graded |
3E
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High rostral to low caudal gradient.
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Specimen
3F:
embryonic day 18.5
(more )
Specimen
3F:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 18.5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: neocortex |
Present |
Regionally restricted |
3F
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Higher expression in the putative somatosensory area, located roughly in the middle of mediolateral axis. Expression is much higher at rostral levels than at caudal levels.
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Specimen
3G:
embryonic day 18.5
(more )
Specimen
3G:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 18.5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: neocortex |
Weak |
Uniform |
3G
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Expression increased selectively in the presumptive visual and auditory areas. Expression is much higher at rostral levels than at caudal levels.
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Specimen
4A:
postnatal day 0
(more )
Note: 0.5 h after birth. Rostral neocortex.
Specimen
4A:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 0
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Sex:
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Not Specified
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Type:
|
section
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Embedding:
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Cryosection
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Note:
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0.5 h after birth. Rostral neocortex.
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: neocortex |
Strong |
Regionally restricted |
4A
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More pronounced expression in the somatosensory area than at E18.5. The level of expression is strongest in the middle layer.
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TS27: primary somatosensory cortex |
Present |
|
4A
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Specimen
4E:
postnatal day 0
(more )
Note: Caudal neocortex.
Specimen
4E:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 0
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Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Cryosection
|
Note:
|
Caudal neocortex.
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: neocortex |
Strong |
Regionally restricted |
4E
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Highly expressed in the putative visual area in the caudal neocortex. The level of expression is strongest in the middle layer.
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Specimen
4B:
postnatal day 2
(more )
Note: Rostral neocortex.
Specimen
4B:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 2
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Cryosection
|
Note:
|
Rostral neocortex.
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Specimen
4F:
postnatal day 2
(more )
Note: Caudal neocortex.
Specimen
4F:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 2
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Note:
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Caudal neocortex.
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Specimen
4C:
postnatal day 5
(more )
Note: Rostral neocortex.
Specimen
4C:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Note:
|
Rostral neocortex.
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: primary somatosensory cortex |
Strong |
Regionally restricted |
4C
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Expressed in layers 4 and 5.
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TS28: cortical layer IV |
Strong |
Regionally restricted |
4C
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Expressed in the primary somatosensory area, including the posteromedial barrel subfield.
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TS28: cortical layer V |
Strong |
Regionally restricted |
4C
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Expressed in the primary somatosensory area, including the posteromedial barrel subfield.
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Specimen
4G:
postnatal day 5
(more )
Note: Caudal neocortex.
Specimen
4G:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Note:
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Caudal neocortex.
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Specimen
6E:
postnatal day 1
(more )
Note: 24 h after birth
Specimen
6E:
(close )
Genetic Background:
|
ICR
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Age:
|
postnatal day 1
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
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Note:
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24 h after birth
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Specimen
6G:
postnatal day 5
(more )
Specimen
6G:
(close )
Genetic Background:
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ICR
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Age:
|
postnatal day 5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Cryosection
|
Specimen
not shown:
postnatal day 2
(more )
Specimen
not shown:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 2
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: medial geniculate nucleus |
Present |
Graded |
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Increased expression compared to E17.5. Expressed strongly in what appears to be the medial subdivision that relays trigeminal system inputs, and low or nondetectable expression in the lateral subdivision that relays lemniscal inputs.
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Specimen
not shown:
embryonic day 17.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 17.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Cryosection
|
Specimen
not shown:
postnatal day 0
(more )
Note: 0.5 h after birth.
Specimen
not shown:
(close )
Genetic Background:
|
ICR
|
Age:
|
postnatal day 0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Cryosection
|
Note:
|
0.5 h after birth.
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: neocortex |
Strong |
Regionally restricted |
|
Highly expressed in auditory areas in the caudal neocortex.
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