Gene Expression Data
Assay Details
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Assay
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Reference:
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J:91405
Abdelkhalek HB, et al., The mouse homeobox gene Not is required for caudal notochord development and affected by the truncate mutation. Genes Dev. 2004 Jul 15;18(14):1725-36
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5688391
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Gene symbol:
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T
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Gene name:
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brachyury, T-box transcription factor T
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Probe:
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T probe24
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
3Ea:
embryonic day 11.0-11.5
(more  )
Specimen
3Ea:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0-11.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
3Ef:
embryonic day 11.0-11.5; Nototc/ Nototc
(more )
Specimen
3Ef:
(close )
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Genetic Background:
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STOCK Nototc/J
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Mutant Allele(s):
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Nototc/Nototc
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Age:
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embryonic day 11.0-11.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: notochord |
Present |
Regionally restricted |
3Ef
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There are gaps in expression in this mutant.
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Specimen
5Ca:
embryonic day 9.5
(more )
Specimen
5Ca:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
5Cb:
(close )
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Genetic Background:
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STOCK Nototc/J
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Mutant Allele(s):
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Nototc/Nototc
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: notochord |
Present |
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5Cb
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Expression in this mutant is the same as in wild type embryos.
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Specimen
5Cc:
(close )
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Genetic Background:
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involves: 129S1/SvImJ
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Mutant Allele(s):
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Nototm1Gos/Nototm1Gos
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: notochord |
Present |
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5Cc
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Expression in this mutant is the same as in wild type embryos.
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Specimen
5Cd:
embryonic day 10.5
(more )
Specimen
5Cd:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
5Ce:
(close )
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Genetic Background:
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STOCK Nototc/J
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Mutant Allele(s):
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Nototc/Nototc
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
5Cf:
(close )
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Genetic Background:
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involves: 129S1/SvImJ
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Mutant Allele(s):
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Nototm1Gos/Nototm1Gos
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
5Cg:
(close )
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Genetic Background:
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STOCK Nototc/J
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Mutant Allele(s):
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Nototc/Nototc
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: notochord |
Present |
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5Cg
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Two out of six embryos showed notochord defects posterior to the hindlimb buds.
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Specimen
5Ch:
(close )
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Genetic Background:
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involves: 129S1/SvImJ
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Mutant Allele(s):
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Nototm1Gos/Nototm1Gos
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: notochord |
Present |
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5Ch
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Two out of nine embryos showed anterior notochord defects.
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Analysis Tools