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Gene Expression Data
Assay Details
Assay
Reference: J:41898 Nakagawa S, et al., Prominent expression of nuclear hormone receptor ROR alpha in Purkinje cells from early development. Neurosci Res. 1997 Jun;28(2):177-84
Assay type: RNA in situ
MGI Accession ID: MGI:5662288
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Probe: probe1
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen 1a: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Present 1a
TS28: thalamus Present 1a

Specimen 1b: postnatal day 21; Rorasg/Rorasg (more )
Structure Level Pattern Image Note
TS28: thalamus Present 1b
TS28: cerebellum Weak 1b

Specimen 2a: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Strong 2a

Specimen 2b: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Strong 2b
TS28: cerebellum granule cell layer Present Single cells 2b
TS28: cerebellum molecular layer Present Single cells 2b

Specimen 3a/b: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: geniculate thalamic group Very strong 3a/b
TS28: medial dorsal thalamic nucleus Very strong 3a/b
TS28: thalamic nucleus Very strong 3a/b
TS28: ventral posterior lateral thalamic nucleus Very strong 3a/b
TS28: telencephalon Weak Regionally restricted 3a/b Expression is in some sensory pathways.
TS28: cortical layer IV Weak 3a/b

Specimen 3c: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: ventral posterior lateral thalamic nucleus Present 3c

Specimen 4a/b: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: brainstem Present Regionally restricted 4a/b Expression is in some sensory pathways.
TS28: main olfactory bulb glomerular layer Present 4a/b
TS28: main olfactory bulb granule cell layer Present 4a/b
TS28: main olfactory bulb mitral cell layer Present 4a/b

Specimen 4c/d: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: dorsal cochlear nucleus Present 4c/d
TS28: inferior colliculus Present 4c/d
TS28: superior olivary nucleus Present 4c/d
TS28: trigeminal V sensory nucleus Present 4c/d

Specimen 4e/f: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: dorsal cochlear nucleus Present 4e/f
TS28: inferior olivary nucleus Present 4e/f

Specimen 4g/h: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cuneate nucleus Present 4g/h
TS28: inferior olivary nucleus Present 4g/h
TS28: trigeminal V spinal sensory nucleus Present 4g/h

Specimen 5a: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Regionally restricted 5a Expression is in Purkinje cells in the cortical region.

Specimen 5d: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Regionally restricted 5d Expression is in Purkinje cells and in a layer beneath the external granular layer in the Purkinje cell plate.

Specimen 5e: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present 5e Expression is in Purkinje cells and in a layer beneath the external granular layer in the Purkinje cell plate.

Specimen 6a: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Very strong 6a

Specimen 6b: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: cerebellum Purkinje cell layer Very strong 6b

Specimen 6c: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Very strong 6c
TS28: cerebellum molecular layer Weak 6c

Specimen 6d: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Very strong 6d
TS28: cerebellum internal granule cell layer Weak 6d
TS28: cerebellum external granule cell layer Absent 6d

Specimen 6e: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Very strong 6e

Specimen 7a: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Very strong 7a

Specimen 7c: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Very strong 7c

Specimen 7d: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Very strong 7d

Specimen 7e: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Very strong 7e

Specimen not shown E15: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: thalamus Present
TS23: hippocampus Absent

Specimen not shown E18: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamus Present
TS26: hippocampus Absent

Specimen not shown P1: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: thalamus Present
TS27: hippocampus Absent

Specimen not shown P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: thalamus Present
TS28: hippocampus Absent

Specimen not shown P14: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: thalamus Present
TS28: hippocampus Absent

Specimen not shown P21: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: hippocampus Absent


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory