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Gene Expression Data
Assay Details
Assay
Reference: J:75989 Sorensen AB, et al., Alternative splicing, expression, and gene structure of the septin-like putative proto-oncogene Sint1. Gene. 2002 Feb 20;285(1-2):79-89
Assay type: RNA in situ
MGI Accession ID: MGI:5661201
Gene symbol: Septin9
Gene name: septin 9
Probe: Sint1 cDNA probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 5A: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present 5A
TS12: somite Present 5A
TS12: neural ectoderm Weak 5A

Specimen 5B: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: lateral plate mesoderm Present 5B
TS12: somite Present 5B
TS12: trunk unsegmented mesenchyme Absent 5B
TS12: allantois Weak 5B

Specimen not shown: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: mesenchyme derived from lateral plate Present Regionally restricted Lateral plate expression focused in developing forelimb and hindlimb buds.
TS14: 1st branchial arch Present
TS14: 2nd branchial arch Present
TS14: otic pit Present
TS14: somite Weak
TS14: mesenchyme derived from neural crest Strong Regionally restricted Strong segmental expression in neural crest cells giving rise to dorsal root ganglia.

Specimen 5C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: tail somite Present Regionally restricted 5C In tailbud, expression in newly formed somites.

Specimen 5D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch mesenchyme Strong 5D
TS15: limb mesenchyme Strong 5D
TS15: olfactory placode Strong 5D

Specimen 5E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch mesenchyme Strong 5E
TS15: dorsal root ganglion Strong 5E
TS15: limb mesenchyme Strong 5E

Specimen 5F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb Strong Regionally restricted 5F Strong expression more confined to limbs and newoly formed dorsal root ganglia of tail.
TS17: tail mesenchyme derived from neural crest Strong Regionally restricted 5F Strong expression more confined to limbs and newoly formed dorsal root ganglia of tail.

Specimen 5G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: autopod Present Regionally restricted 5G Expression concentrating around developing digits.

Specimen 5H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: autopod Present Regionally restricted 5H Expression concentrating around developing digits.
TS20: mammary bud Present 5H
TS20: vibrissa follicle Present 5H

Specimen 5I: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: autopod Strong Regionally restricted 5I Expression concentrating around developing digits.

Specimen 5J: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch mesenchyme Strong 5J
TS15: neural crest Strong 5J

Specimen 5K: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: dorsal root ganglion Present 5K
TS15: sclerotome Present 5K

Specimen 5L: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: dorsal root ganglion Present 5L
TS15: sclerotome Present 5L
TS15: dermomyotome Present Regionally restricted 5L No expression in outer cells of dermomyotome.
TS15: nephric duct, mesonephric portion Present Regionally restricted 5L Weak to moderate expression in mesonephric duct.

Specimen 5M: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: otocyst Present 5M

Specimen 5N: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Present 5N

Specimen 5O: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: tail unsegmented mesenchyme Absent 5O

Specimen not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: gut Present
TS15: neural ectoderm Present
TS15: notochord Present
TS15: heart Absent
TS15: surface ectoderm Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory