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Gene Expression Data
Assay Details
Assay
Reference: J:47697 Jain S, et al., Expression of ARNT, ARNT2, HIF1 alpha, HIF2 alpha and Ah receptor mRNAs in the developing mouse. Mech Dev. 1998 Apr;73(1):117-23
Assay type: RNA in situ
MGI Accession ID: MGI:5637328
Gene symbol: Hif1a
Gene name: hypoxia inducible factor 1, alpha subunit
Probe: Hif1a cDNA6
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 1st branchial arch Present 1_HIF1 alpha
TS15: 2nd branchial arch Present 1_HIF1 alpha
TS15: future brain Present 1_HIF1 alpha
TS15: future spinal cord Present 1_HIF1 alpha
TS15: gut Present 1_HIF1 alpha
TS15: heart Present 1_HIF1 alpha
TS15: hepatic primordium Present 1_HIF1 alpha
TS15: trigeminal preganglion Present 1_HIF1 alpha
TS15: atrioventricular canal Strong 1_HIF1 alpha
TS15: cardiac muscle tissue Strong Regionally restricted 1_HIF1 alpha Expression was in the myocardial wall.
Specimen 2: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: metanephros Strong 2_HIF1 alpha
TS21: nervous system Strong 2_HIF1 alpha
TS21: olfactory epithelium Strong 2_HIF1 alpha
TS21: pituitary gland Strong 2_HIF1 alpha
TS21: thymus primordium Strong 2_HIF1 alpha
TS21: heart ventricle Strong Regionally restricted 2_HIF1 alpha High levels of expression were detected in the ventricular wall of the heart.
Specimen 3A: embryonic day 15.5 (more )
Note: Section of the head.
Structure Level Pattern Image Note
TS23: head Weak Ubiquitous 3A HIF1 alpha
Specimen 3B: embryonic day 15.5 (more )
Note: Section of the trunk.
Structure Level Pattern Image Note
TS23: trunk Weak Ubiquitous 3B HIF1 alpha
Specimen 4 bladder: postnatal adult (more )
Structure Level Pattern Image Note
TS28: bladder Present Regionally restricted 4_HIF1 alpha bladder Expression was detected in the transitional epithelium.
Specimen 4 testes: postnatal adult (more )
Structure Level Pattern Image Note
TS28: seminiferous tubule epithelium Present Regionally restricted 4_HIF1 alpha testes Expression was detected in the primary gonocytes.
Specimen 4 YS: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: yolk sac Present Regionally restricted 4_HIF1 alpha YS Expression was detected in the visceral layer.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory