About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:203065 Sugiyama T, et al., The germinal matrices in the developing dentate gyrus are composed of neuronal progenitors at distinct differentiation stages. Dev Dyn. 2013 Dec;242(12):1442-53
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5587815
Gene symbol: Sox2
Gene name: SRY (sex determining region Y)-box 2
Antibody: anti-Sox2 (AF2018)
Detection system: Secondary antibody coupled to Cy3
Results
Specimen 2E: embryonic day 12.5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 2E , 2G Expression is stronger in the cortical hem than the dentate neuroepithelium.
Specimen 2H: embryonic day 12.5 (more )
Note: Double labeled: red - Sox2; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 2H Expression is stronger in the cortical hem than the dentate neuroepithelium.
Specimen 5A: embryonic day 14.5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS22: telencephalon Present Regionally restricted 5A Expression is in the primary germinal matrix in the developing dentate gyrus.
Specimen 5B: embryonic day 14.5 (more )
Note: Double labeled: red - Sox2; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS22: telencephalon Present Regionally restricted 5B Expression is in the primary germinal matrix in the developing dentate gyrus.
Specimen 5E: embryonic day 16.5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5E Expression is in the primary and secondary germinal matrices of the forming dentate gyrus.
Specimen 5F: embryonic day 16.5 (more )
Note: Double labeled: red - Sox2; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5F Expression is in the primary and secondary germinal matrices of the forming dentate gyrus.
Specimen 5I: embryonic day 16.5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5I Expression is in the tertiary germinal matrix of the forming dentate gyrus.
Specimen 5J: embryonic day 16.5 (more )
Note: Double labeled: red - Sox2; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5J Expression is in the tertiary germinal matrix of the forming dentate gyrus.
Specimen 5M: embryonic day 18.5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS26: dentate gyrus Present Regionally restricted 5M Expression is in the secondary germinal matrix.
Specimen 5N: embryonic day 18.5 (more )
Note: Double labeled: red - Sox2; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS26: dentate gyrus Present Regionally restricted 5N Expression is in the secondary germinal matrix.
Specimen 5Q: embryonic day 18.5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS26: dentate gyrus Present Regionally restricted 5U , 5Q Expression is in the tertiary germinal matrix.
Specimen 5R: embryonic day 18.5 (more )
Note: Double labeled: red - Sox2; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS26: dentate gyrus Present Regionally restricted 5R , 5V Expression is in the tertiary germinal matrix.
Specimen 6A: postnatal day 5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 6b right , 6b left , 6a right , 6A , 6a left Expression is predominantly surrounding the granule cell layer.
Specimen 6D: postnatal day 10 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 6g right , 6D , 6g left Expression is predominantly surrounding the granule cell layer.
TS28: dentate gyrus subgranular zone Present 6g right , 6D , 6g left
Specimen 6G: postnatal day 20 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus subgranular zone Present 6G , 6j left , 6j right
Specimen 7A: postnatal day 5 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 7A Expression is in the lateral end of the lower blade of the dentate gyrus.
Specimen 7D: postnatal day 10 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 7D Expression is in the lateral end of the lower blade of the dentate gyrus.
Specimen 7G: postnatal day 20 (more )
Note: Double labeled: red - Sox2; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus subgranular zone Present 7G
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory