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Gene Expression Data
Assay Details
Assay
Reference: J:154364 Beaubien F, et al., Differential expression of slitrk family members in the mouse nervous system. Dev Dyn. 2009 Nov 18;238(12):3285-3296
Assay type: RNA in situ
MGI Accession ID: MGI:5578590
Gene symbol: Slitrk6
Gene name: SLIT and NTRK-like family, member 6
Probe: IMAGE clone 8861685
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamus Present 1F
Specimen 2F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: main olfactory bulb Absent 2F
Specimen 2L: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb Absent 2L
Specimen 3K: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Absent 3K
Specimen 3L: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Absent 3L
Specimen 4F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: hippocampus Absent 4F
Specimen 4L: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus Absent 4L
Specimen 5A: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamus Present Regionally restricted 5A Expressed in the paraventricular, paratenial, anteroventral, anteromedial, and low levels in laterodorsal thalamic nuclei.
Specimen 5B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamus Present Regionally restricted 5B Expressed in the mediodorsal, ventrolateral, and low levels in laterodorsal thalamic nuclei.
Specimen 5C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamus Present Regionally restricted 5C Expressed in the centromedial, lateral posterior, posterior complex, ventroposterior, and lower levels in dorsal lateral geniculate (dLG) nuclei.
Specimen 5D: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamus Present Regionally restricted 5D Expressed in the lateral posterior, posterior complex, ventroposterior, and parafascicular thalamic nuclei.
Specimen 6F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Present 6F
TS26: cerebellum Present Regionally restricted 6F Expressed in the medial cerebellar nucleus.
Specimen 7F: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 7F
Specimen 8F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: dorsal root ganglion Absent 8F
TS26: spinal cord Absent 8F
Specimen 9F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: trigeminal ganglion Absent 9F
Specimen 10F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: retina nuclear layer Present Regionally restricted 10F Expressed in the outer aspect of the neuroblastic layer.
Specimen not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: olfactory epithelium Present
TS26: vomeronasal organ Absent
TS26: diencephalon Present Regionally restricted Expressed in the dorsolateral septum.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory