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Gene Expression Data
Assay Details
Assay
Reference: J:154364 Beaubien F, et al., Differential expression of slitrk family members in the mouse nervous system. Dev Dyn. 2009 Nov 18;238(12):3285-3296
Assay type: RNA in situ
MGI Accession ID: MGI:5578585
Gene symbol: Slitrk2
Gene name: SLIT and NTRK-like family, member 2
Probe: IMAGE clone 40060548
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: brain Present Widespread 1B Expressed widely in the brain. Highly expressed in the neuroepithelium.
Specimen 2B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: main olfactory bulb Present Regionally restricted 2B Expressed in cells lining the olfactory ventricule, in the glomerular layer, and at low levels in the olfactory nerve layer.
Specimen 2H: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb Absent 2H
TS28: main olfactory bulb glomerular layer Absent 2H
Specimen 3C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex ventricular zone Strong Regionally restricted 3C Expressed in the basal layer.
TS26: cortical plate Weak 3C
Specimen 3D: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 3D Expression is significantly lower than at E18.5.
Specimen 4B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: hippocampus CA1 Weak 4B
TS26: hippocampus CA3 Weak 4B
TS26: dentate gyrus Absent 4B
Specimen 4H: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Weak 4H
TS28: hippocampus CA3 Weak 4H
TS28: dentate gyrus Present 4H
Specimen 6B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebellum Purkinje cell layer Present 6B
TS26: cerebellum Present Regionally restricted 6B Expressed in cells lining the aqueduct.
Specimen 7B: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Strong 7B
TS28: cerebellum Purkinje cell layer Present 7B Decreased expression compared with embryonic day 18.5.
Specimen 8B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: spinal cord Present Regionally restricted 8B Expressed in the gray matter. Higher levels of expression are observed in the ventral part where motor neurons are located.
TS26: dorsal root ganglion Present Regionally restricted 8B Expressed in a subset of sensory neuron nuclei.
Specimen 9B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: trigeminal ganglion Strong Regionally restricted 9B Expressed in subsets of cell bodies.
Specimen 10B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: retina nuclear layer Present Regionally restricted 10B Expressed in the inner aspect of the neuroblastic layer.
Specimen not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: vomeronasal organ Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory