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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541762
Gene symbol: Ttc36
Gene name: tetratricopeptide repeat domain 36
Probe: RIKEN clone C730003P07 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:13583: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:13583
TS23: metanephros Present GUDMAP:13583
TS23: renal cortex Present GUDMAP:13583
TS23: cortical renal tubule Present GUDMAP:13583
TS23: cortical early proximal tubule Present Regionally restricted GUDMAP:13583
TS23: late tubule Present GUDMAP:13583
TS23: nephrogenic zone Absent GUDMAP:13583
TS23: nephrogenic interstitium Absent GUDMAP:13583
TS23: cap mesenchyme Absent GUDMAP:13583
TS23: pretubular aggregate Absent GUDMAP:13583
TS23: ureteric tip Absent GUDMAP:13583
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:13583
TS23: renal vesicle Absent GUDMAP:13583
TS23: comma-shaped body Absent GUDMAP:13583
TS23: s-shaped body Absent GUDMAP:13583
TS23: capillary loop renal corpuscle Absent GUDMAP:13583
TS23: maturing renal corpuscle Absent GUDMAP:13583
TS23: renal connecting tubule Absent GUDMAP:13583
TS23: cortical collecting duct Absent GUDMAP:13583
TS23: renal cortical interstitium Absent GUDMAP:13583
TS23: renal cortical vasculature Absent GUDMAP:13583
TS23: early tubule Absent GUDMAP:13583
TS23: early proximal tubule of maturing nephron Present Regionally restricted GUDMAP:13583 Expression detected in presumptive S2 and S3 segments. Note that only weak expression was detected in the S1 segment adjacent to renal corpuscle and only in a subset of nephrons.
TS23: cortical renal tubule of maturing nephron group Present GUDMAP:13583
TS23: renal connecting tubule of maturing nephron Absent GUDMAP:13583
TS23: maturing nephron Present GUDMAP:13583
TS23: renal medulla Present GUDMAP:13583
TS23: immature loop of Henle Present Regionally restricted GUDMAP:13583 graded expression; Varied expression strengths detected in immature loop of Henle.
TS23: renal medullary interstitium Absent GUDMAP:13583
TS23: renal medullary vasculature Absent GUDMAP:13583
TS23: renal pelvis Present GUDMAP:13583
TS23: pelvic urothelial lining Present GUDMAP:13583 Only detected in the lining adjacent to the medullary collecting ducts.
TS23: pelvic smooth muscle Absent GUDMAP:13583
TS23: perihilar interstitium Absent GUDMAP:13583
TS23: renal interstitium Absent GUDMAP:13583
TS23: early proximal tubule of capillary loop nephron Ambiguous GUDMAP:13583
TS23: early distal tubule of maturing nephron Ambiguous GUDMAP:13583 The majority of early distal tubules of maturing nephrons show no expression, however it is difficult to determine if this is true for all distal tubules.
TS23: anlage of loop of Henle of cortical renal tubule Present GUDMAP:13583
TS23: cortical early distal tubule Present GUDMAP:13583
TS23: early distal tubule of capillary loop nephron Present GUDMAP:13583
TS23: renal connecting tubule of capillary loop nephron Absent GUDMAP:13583
TS23: cortical renal tubule of capillary loop nephron group Present GUDMAP:13583
TS23: renal capsule Absent GUDMAP:13583
TS23: medullary collecting duct Present GUDMAP:13583
TS23: ureter Ambiguous GUDMAP:13583
TS23: urothelium of ureter Ambiguous GUDMAP:13583
Specimen GUDMAP:13704: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: metanephros Present GUDMAP:13704
TS23: urinary system Present GUDMAP:13704
TS23: renal cortex Present GUDMAP:13704
TS23: cortical renal tubule Present Regionally restricted GUDMAP:13704
TS23: cortical early proximal tubule Present Regionally restricted GUDMAP:13704
TS23: early proximal tubule of maturing nephron Present Regionally restricted GUDMAP:13704 Strong expression detected in a subset of early proximal tubules of maturing stage IV nephrons which includes presumptive S2 and S3 segments. Expression is absent from at least a portion of the S1 segment closest to the renal corpuscle.
TS23: cortical early distal tubule Present GUDMAP:13704
TS23: early tubule Absent GUDMAP:13704
TS23: developing capillary loop stage nephron group Present GUDMAP:13704
TS23: maturing nephron Present GUDMAP:13704
TS23: late tubule Present GUDMAP:13704
TS23: renal medulla Present GUDMAP:13704
TS23: immature loop of Henle Present GUDMAP:13704
TS23: nephrogenic zone Absent GUDMAP:13704
TS23: nephrogenic interstitium Absent GUDMAP:13704
TS23: cap mesenchyme Absent GUDMAP:13704
TS23: pretubular aggregate Absent GUDMAP:13704
TS23: ureteric tip Absent GUDMAP:13704
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:13704
TS23: renal vesicle Absent GUDMAP:13704
TS23: comma-shaped body Absent GUDMAP:13704
TS23: s-shaped body Absent GUDMAP:13704
TS23: capillary loop renal corpuscle Absent GUDMAP:13704
TS23: maturing renal corpuscle Absent GUDMAP:13704
TS23: renal connecting tubule Absent GUDMAP:13704
TS23: renal connecting tubule of capillary loop nephron Absent GUDMAP:13704
TS23: renal connecting tubule of maturing nephron Absent GUDMAP:13704
TS23: collecting duct Absent GUDMAP:13704
TS23: ureteric trunk Absent GUDMAP:13704
TS23: early proximal tubule of capillary loop nephron Absent GUDMAP:13704
TS23: anlage of loop of Henle of cortical renal tubule Ambiguous GUDMAP:13704
TS23: early distal tubule of maturing nephron Ambiguous GUDMAP:13704 Expression possible in early distal tubules of maturing stage IV nephrons, however these tubules are difficult to differentiate from early proximal tubules.
TS23: early distal tubule of capillary loop nephron Present GUDMAP:13704
TS23: cortical collecting duct Absent GUDMAP:13704
TS23: renal cortical interstitium Absent GUDMAP:13704
TS23: renal cortical vasculature Absent GUDMAP:13704
TS23: cortical renal tubule of maturing nephron group Present Regionally restricted GUDMAP:13704
TS23: cortical renal tubule of capillary loop nephron group Present Regionally restricted GUDMAP:13704
TS23: medullary collecting duct Absent GUDMAP:13704
TS23: renal medullary interstitium Absent GUDMAP:13704
TS23: renal medullary vasculature Absent GUDMAP:13704
TS23: renal interstitium Absent GUDMAP:13704
TS23: ureter Absent GUDMAP:13704
TS23: urothelium of ureter Absent GUDMAP:13704
TS23: ureteral mesenchyme Absent GUDMAP:13704
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/30/2025
MGI 6.24 		The Jackson Laboratory