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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541623
Gene symbol: Hs3st3b1
Gene name: heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
Probe: RIKEN clone 4833401D16 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:11741: embryonic day 13.5 (more )
Note: Labeling was visualized using BM purple. This specimen annotates metanephros. Expression pattern for female was identical but images not shown.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:11741
TS21: metanephros Present GUDMAP:11741
TS21: ureter Absent GUDMAP:11741
TS21: primitive bladder Absent GUDMAP:11741
TS21: early nephron Present GUDMAP:11741
TS21: urinary system mesentery Absent GUDMAP:11741
TS21: cap mesenchyme Absent GUDMAP:11741
TS21: nephrogenic interstitium Absent GUDMAP:11741
TS21: renal capsule Absent GUDMAP:11741
TS21: ureteric tip Absent GUDMAP:11741
TS21: renal interstitium Absent GUDMAP:11741
TS21: ureteric tree terminal branch excluding tip itself Absent GUDMAP:11741
TS21: ureteric trunk Absent GUDMAP:11741
TS21: developing vasculature of metanephros Absent GUDMAP:11741
TS21: renal pelvis Absent GUDMAP:11741
TS21: nephrogenic zone Present GUDMAP:11741
TS21: pretubular aggregate Ambiguous GUDMAP:11741
TS21: renal tubule Present GUDMAP:11741
TS21: primitive collecting duct Absent GUDMAP:11741
Specimen GUDMAP:11742: embryonic day 13.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS21: male reproductive system Present GUDMAP:11742
TS21: genital tubercle of male Present GUDMAP:11742
TS21: mesonephros of male Absent GUDMAP:11742
TS21: nephric duct of male, rest of Ambiguous GUDMAP:11742
TS21: paramesonephric duct of male, rest of Ambiguous GUDMAP:11742
TS21: testis Present GUDMAP:11742
TS21: preputial swelling of male Present GUDMAP:11742
TS21: interstitium of the testis Present GUDMAP:11742
TS21: primary sex cord Absent GUDMAP:11742
TS21: distal genital tubercle of male Present Regionally restricted GUDMAP:11742 distal expression
TS21: mesenchyme of distal genital tubercle of male Present GUDMAP:11742
TS21: skin of distal genital tubercle of male Present GUDMAP:11742
TS21: proximal genital tubercle of male Present Regionally restricted GUDMAP:11742
TS21: mesenchyme of proximal genital tubercle of male Present GUDMAP:11742
TS21: mesenchyme of male preputial swelling Present GUDMAP:11742
TS21: epithelium of phallic urethra of male Absent GUDMAP:11742
TS21: developing vasculature of male genital tubercle Absent GUDMAP:11742
Specimen GUDMAP:11743: embryonic day 13.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS21: female reproductive system Present GUDMAP:11743
TS21: genital tubercle of female Present GUDMAP:11743
TS21: preputial swelling of female Present GUDMAP:11743
TS21: paramesonephric duct of female, rest of Present GUDMAP:11743
TS21: ovary Ambiguous GUDMAP:11743
TS21: nephric duct of female, rest of Absent GUDMAP:11743
TS21: paramesonephric duct of female, mesonephric portion Present GUDMAP:11743
TS21: mesonephros of female Present GUDMAP:11743
TS21: mesonephric mesenchyme of female Absent GUDMAP:11743
TS21: mesonephric tubule of female Absent GUDMAP:11743
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:11743
TS21: distal genital tubercle of female Present Regionally restricted GUDMAP:11743 distal expression
TS21: mesenchyme of distal genital tubercle of female Present GUDMAP:11743
TS21: proximal genital tubercle of female Present Regionally restricted GUDMAP:11743
TS21: mesenchyme of proximal genital tubercle of female Present GUDMAP:11743
TS21: mesenchyme of female preputial swelling Present GUDMAP:11743
TS21: epithelium of phallic urethra of female Absent GUDMAP:11743
TS21: developing vasculature of female genital tubercle Absent GUDMAP:11743
Specimen GUDMAP:11744: embryonic day 13.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS21: female reproductive system Present GUDMAP:11744
TS21: genital tubercle of female Present GUDMAP:11744 Genital tubercle entry was annotated as a separate entry.
TS21: paramesonephric duct of female, mesonephric portion Present GUDMAP:11744
TS21: paramesonephric duct of female, rest of Present GUDMAP:11744
TS21: ovary Ambiguous GUDMAP:11744
TS21: mesonephros of female Present GUDMAP:11744
TS21: mesonephric mesenchyme of female Absent GUDMAP:11744
TS21: mesonephric tubule of female Absent GUDMAP:11744
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:11744
TS21: nephric duct of female, rest of Absent GUDMAP:11744
Specimen GUDMAP:11745: embryonic day 10.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS17: genital swelling Absent GUDMAP:11745
TS17: cloaca Present GUDMAP:11745
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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