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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540903
Gene symbol: Slc22a6
Gene name: solute carrier family 22 (organic anion transporter), member 6
Probe: RIKEN clone 9630022J22 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9116: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present Regionally restricted GUDMAP:9116
TS23: metanephros Present Regionally restricted GUDMAP:9116
TS23: renal cortex Present Regionally restricted GUDMAP:9116
TS23: cortical renal tubule Present Regionally restricted GUDMAP:9116
TS23: cortical early proximal tubule Present Regionally restricted GUDMAP:9116 weak expression in presumptive S1 segment of early proximal tubule at urinary pole of maturing nephrons
TS23: maturing nephron Present Regionally restricted GUDMAP:9116
TS23: renal capsule Absent GUDMAP:9116
TS23: nephrogenic zone Absent GUDMAP:9116
TS23: nephrogenic interstitium Absent GUDMAP:9116
TS23: cap mesenchyme Absent GUDMAP:9116
TS23: pretubular aggregate Absent GUDMAP:9116
TS23: ureteric tip Absent GUDMAP:9116
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9116
TS23: renal vesicle Absent GUDMAP:9116
TS23: comma-shaped body Absent GUDMAP:9116
TS23: upper limb of comma-shaped body Absent GUDMAP:9116
TS23: lower limb of comma-shaped body Absent GUDMAP:9116
TS23: s-shaped body Absent GUDMAP:9116
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:9116
TS23: distal segment of s-shaped body Absent GUDMAP:9116
TS23: medial segment of s-shaped body Absent GUDMAP:9116
TS23: proximal segment of s-shaped body Absent GUDMAP:9116
TS23: visceral epithelium of s-shaped body Absent GUDMAP:9116
TS23: parietal epithelium of s-shaped body Absent GUDMAP:9116
TS23: capillary loop renal corpuscle Absent GUDMAP:9116
TS23: visceral epithelium of capillary loop renal corpuscle Absent GUDMAP:9116
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:9116
TS23: presumptive mesangium of capillary loop renal corpuscle Absent GUDMAP:9116
TS23: presumptive endothelium of capillary loop renal corpuscle Absent GUDMAP:9116
TS23: associated interstitium of capillary loop renal corpuscle Absent GUDMAP:9116
TS23: maturing renal corpuscle Absent GUDMAP:9116
TS23: maturing glomerular tuft Absent GUDMAP:9116
TS23: glomerular capillary system of maturing glomerular tuft Absent GUDMAP:9116
TS23: glomerular basement membrane of maturing renal corpuscle Absent GUDMAP:9116
TS23: glomerular mesangium of maturing glomerular tuft Absent GUDMAP:9116
TS23: visceral epithelium of maturing renal corpuscle Absent GUDMAP:9116
TS23: Bowman's capsule of maturing renal corpuscle Absent GUDMAP:9116
TS23: parietal epithelium of maturing renal corpuscle Absent GUDMAP:9116
TS23: glomerular mesangium of maturing renal corpuscle Absent GUDMAP:9116
TS23: juxtaglomerular arteriole Absent GUDMAP:9116
TS23: anlage of loop of Henle of cortical renal tubule Absent GUDMAP:9116
TS23: renal connecting tubule Absent GUDMAP:9116
TS23: cortical collecting duct Absent GUDMAP:9116
TS23: renal cortical interstitium Absent GUDMAP:9116
TS23: renal cortical vasculature Absent GUDMAP:9116
TS23: renal cortical arterial system Absent GUDMAP:9116
TS23: renal cortical venous system Absent GUDMAP:9116
TS23: renal cortical capillary Absent GUDMAP:9116
TS23: renal medulla Absent GUDMAP:9116
TS23: immature loop of Henle Absent GUDMAP:9116
TS23: straight limb of immature loop of Henle Absent GUDMAP:9116
TS23: bend of immature loop of Henle Absent GUDMAP:9116
TS23: renal medullary interstitium Absent GUDMAP:9116
TS23: renal medullary vasculature Absent GUDMAP:9116
TS23: renal medullary arterial system Absent GUDMAP:9116
TS23: renal medullary venous system Absent GUDMAP:9116
TS23: renal medullary capillary Absent GUDMAP:9116
TS23: medullary collecting duct Absent GUDMAP:9116
TS23: renal calyx Absent GUDMAP:9116
TS23: renal pelvis Absent GUDMAP:9116
TS23: pelvic urothelial lining Absent GUDMAP:9116
TS23: pelvic smooth muscle Absent GUDMAP:9116
TS23: perihilar interstitium Absent GUDMAP:9116
TS23: developing capillary loop stage nephron group Absent GUDMAP:9116
TS23: collecting duct Absent GUDMAP:9116
TS23: renal interstitium Absent GUDMAP:9116
TS23: renal vasculature Absent GUDMAP:9116
TS23: early nephron Absent GUDMAP:9116
TS23: cortical early distal tubule Ambiguous GUDMAP:9116 note it is very hard to distinguish distal tubule at this stage
TS23: early proximal tubule of maturing nephron Present GUDMAP:9116
TS23: cortical renal tubule of maturing nephron group Present GUDMAP:9116
TS23: distal renal vesicle Absent GUDMAP:9116
TS23: proximal renal vesicle Absent GUDMAP:9116
TS23: renal connecting segment of renal vesicle Absent GUDMAP:9116
TS23: renal connecting segment of comma-shaped body Absent GUDMAP:9116
TS23: cortical renal tubule of capillary loop nephron group Absent GUDMAP:9116
TS23: early proximal tubule of capillary loop nephron Absent GUDMAP:9116
TS23: early distal tubule of capillary loop nephron Absent GUDMAP:9116
TS23: renal connecting tubule of capillary loop nephron Absent GUDMAP:9116
TS23: renal connecting tubule of maturing nephron Absent GUDMAP:9116
TS23: early distal tubule of maturing nephron Ambiguous GUDMAP:9116

Specimen GUDMAP:9117: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Absent GUDMAP:9117
TS23: urothelium of ureter Absent GUDMAP:9117
TS23: ureteral mesenchyme Absent GUDMAP:9117
TS23: ureteral mesenchyme subepithelial layer Absent GUDMAP:9117
TS23: ureteral smooth muscle layer Absent GUDMAP:9117
TS23: ureteral mesenchyme outer layer Absent GUDMAP:9117

Specimen GUDMAP:13939: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple. Moderate expression was seen with the low level expression control (Shh). Thus, low levels of mRNA expression should be detectable in this experiment.
Structure Level Pattern Image Note
TS28: urinary system Present GUDMAP:13939
TS28: metanephros Present GUDMAP:13939
TS28: renal cortex Present GUDMAP:13939
TS28: cortical renal tubule Present GUDMAP:13939
TS28: renal proximal tubule Present Regionally restricted GUDMAP:13939
TS28: renal proximal convoluted tubule Present Regionally restricted GUDMAP:13939 Expression in a subset of proximal convoluted tubules including segment 2 and possibly a subregion of segment 1. Absent from the portion of segment 1 immediately adjacent to the renal corpuscle at the urinary pole.
TS28: segment 2 of proximal tubule Present GUDMAP:13939
TS28: segment 1 of proximal tubule Ambiguous GUDMAP:13939
TS28: proximal straight tubule, cortical portion Absent GUDMAP:13939
TS28: renal distal tubule Absent GUDMAP:13939
TS28: renal connecting tubule Absent GUDMAP:13939
TS28: cortical collecting duct Absent GUDMAP:13939
TS28: renal cortical vasculature Absent GUDMAP:13939
TS28: renal cortical interstitium Absent GUDMAP:13939
TS28: renal medulla Absent GUDMAP:13939
TS28: renal pelvis Absent GUDMAP:13939
TS28: mature renal corpuscle Absent GUDMAP:13939


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory