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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540867
Gene symbol: Hoxa10
Gene name: homeobox A10
Probe: RIKEN clone 0610025N02 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:8842: embryonic day 10.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Present GUDMAP:8842
TS17: mesonephros Present Regionally restricted GUDMAP:8842 caudal expression
TS17: mesonephros mesenchyme Present Regionally restricted GUDMAP:8842 caudal expression; signal absent from the rostral mesonephros
TS17: metanephric mesenchyme Present GUDMAP:8842
TS17: genitourinary system mesenchyme Absent GUDMAP:8842
TS17: gonad primordium Absent GUDMAP:8842
TS17: mesonephric tubule Absent GUDMAP:8842
TS17: nephric duct, mesonephric portion Absent GUDMAP:8842
TS17: nephric duct, metanephric portion Absent GUDMAP:8842
TS17: nephric duct Absent GUDMAP:8842
Specimen GUDMAP:8843: embryonic day 12.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: male reproductive system Present Regionally restricted GUDMAP:8843
TS20: mesonephros of male Present Regionally restricted GUDMAP:8843 caudal expression
TS20: nephric duct of male, mesonephric portion Absent GUDMAP:8843 signal is in the mesenchyme surrounding the duct epithelium in the caudal mesonephros only
TS20: mesonephric mesenchyme of male Present Regionally restricted GUDMAP:8843 caudal expression; restricted signal pattern in the caudal mesonephros and surrounding the duct epithelia
TS20: mesonephric tubule of male Absent GUDMAP:8843
TS20: paramesonephric duct of male, mesonephric portion Absent GUDMAP:8843 signal is in the mesenchyme surrounding the duct epithelium in the caudal mesonephros only
TS20: coelomic epithelium of male mesonephros Absent GUDMAP:8843
TS20: paramesonephric duct of male, rest of Present Regionally restricted GUDMAP:8843 Expression present in the caudal mesenchyme surrounding the epithelia of the paramesonephric and nephric ducts.
TS20: nephric duct of male, rest of Present Regionally restricted GUDMAP:8843 Expression present in the caudal mesenchyme surrounding the epithelia of the paramesonephric and nephric ducts.
TS20: testis Present Regionally restricted GUDMAP:8843
TS20: primary sex cord Present GUDMAP:8843
Specimen GUDMAP:8844: embryonic day 12.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: urinary system Present Regionally restricted GUDMAP:8844
TS20: urogenital mesentery Present GUDMAP:8844
TS20: metanephros Present Regionally restricted GUDMAP:8844
TS20: ureter Ambiguous GUDMAP:8844
TS20: nephrogenic interstitium Present GUDMAP:8844
TS20: cap mesenchyme Present GUDMAP:8844
TS20: pretubular aggregate Ambiguous GUDMAP:8844
TS20: renal interstitium Present GUDMAP:8844 possible expression; structure is masked by strong signal on surface of metanephros
TS20: early nephron Present GUDMAP:8844
TS20: nephrogenic zone Present Regionally restricted GUDMAP:8844
TS20: ureteric tip Absent GUDMAP:8844
Specimen GUDMAP:8845: embryonic day 13.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:8845
TS21: urogenital sinus Present GUDMAP:8845
TS21: primitive bladder Present GUDMAP:8845 signal appears strongest in the rostral bladder
TS21: urothelium of primitive bladder Present GUDMAP:8845
TS21: mesenchymal layer of primitive bladder Present GUDMAP:8845
Specimen GUDMAP:8846: embryonic day 12.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: female reproductive system Present Regionally restricted GUDMAP:8846
TS20: mesonephros of female Present Regionally restricted GUDMAP:8846
TS20: paramesonephric duct of female, rest of Present Regionally restricted GUDMAP:8846 Expression present in the caudal mesenchyme surrounding the epithelia of the paramesonephric and nephric ducts.
TS20: nephric duct of female, rest of Present Regionally restricted GUDMAP:8846 Expression present in the caudal mesenchyme surrounding the epithelia of the paramesonephric and nephric ducts.
TS20: ovary Absent GUDMAP:8846
TS20: coelomic epithelium of female mesonephros Absent GUDMAP:8846
TS20: paramesonephric duct of female, mesonephric portion Absent GUDMAP:8846 signal is in the mesenchyme surrounding the duct epithelium in the caudal mesonephros only
TS20: nephric duct of female, mesonephric portion Absent GUDMAP:8846 signal is in the mesenchyme surrounding the duct epithelium in the caudal mesonephros only
TS20: mesonephric tubule of female Absent GUDMAP:8846
TS20: mesonephric mesenchyme of female Present Regionally restricted GUDMAP:8846 caudal expression
Specimen GUDMAP:8847: embryonic day 12.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS20: urinary system Present Regionally restricted GUDMAP:8847
TS20: urogenital mesentery Present GUDMAP:8847
TS20: metanephros Present Regionally restricted GUDMAP:8847
TS20: nephrogenic interstitium Present GUDMAP:8847
TS20: cap mesenchyme Present GUDMAP:8847
TS20: pretubular aggregate Ambiguous GUDMAP:8847 expression is likely to extend into the pretubular aggregates
TS20: renal vesicle Ambiguous GUDMAP:8847 expression seen in early nephrons may be renal vesicles
TS20: early nephron Present GUDMAP:8847
TS20: nephrogenic zone Present Regionally restricted GUDMAP:8847
TS20: renal interstitium Present GUDMAP:8847
TS20: ureter Ambiguous GUDMAP:8847
TS20: ureteric tip Absent GUDMAP:8847
Specimen GUDMAP:8848: embryonic day 13.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:8848
TS21: urogenital sinus Present GUDMAP:8848
TS21: primitive bladder Present GUDMAP:8848
Specimen GUDMAP:9746: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9746
TS23: metanephros Present Regionally restricted GUDMAP:9746
TS23: nephrogenic zone Present Regionally restricted GUDMAP:9746
TS23: nephrogenic interstitium Present GUDMAP:9746 moderate expression
TS23: cap mesenchyme Present GUDMAP:9746 moderate expression
TS23: pretubular aggregate Present GUDMAP:9746
TS23: ureteric tip Present Regionally restricted GUDMAP:9746 regional strong expression in portion of ureteric tip adjacent to renal connecting tubule
TS23: renal cortex Present Regionally restricted GUDMAP:9746
TS23: s-shaped body Present Regionally restricted GUDMAP:9746
TS23: renal connecting tubule of s-shaped body Present GUDMAP:9746
TS23: distal segment of s-shaped body Present GUDMAP:9746
TS23: cortical renal tubule Present Regionally restricted GUDMAP:9746
TS23: cortical early distal tubule Present GUDMAP:9746 strong expression
TS23: renal connecting tubule Present GUDMAP:9746 strong expression
TS23: renal cortical interstitium Present GUDMAP:9746 weak expression
TS23: renal medulla Present Regionally restricted GUDMAP:9746
TS23: immature loop of Henle Present GUDMAP:9746 weak expression
TS23: renal medullary interstitium Present Regionally restricted GUDMAP:9746 weak expression surrounding collecting ducts and immature loop of Henle
TS23: renal pelvis Present Regionally restricted GUDMAP:9746
TS23: pelvic smooth muscle Present GUDMAP:9746 weak expression
TS23: developing capillary loop stage nephron group Present GUDMAP:9746
TS23: maturing nephron Present GUDMAP:9746
TS23: collecting duct Present GUDMAP:9746
TS23: renal interstitium Present GUDMAP:9746
TS23: early nephron Present GUDMAP:9746
TS23: late tubule Present GUDMAP:9746
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9746
TS23: medial segment of s-shaped body Absent GUDMAP:9746
TS23: proximal segment of s-shaped body Absent GUDMAP:9746
TS23: capillary loop renal corpuscle Absent GUDMAP:9746
TS23: maturing renal corpuscle Absent GUDMAP:9746
TS23: cortical early proximal tubule Absent GUDMAP:9746
TS23: cortical collecting duct Absent GUDMAP:9746
TS23: renal cortical vasculature Absent GUDMAP:9746
TS23: renal medullary vasculature Absent GUDMAP:9746
TS23: medullary collecting duct Absent GUDMAP:9746
TS23: pelvic urothelial lining Absent GUDMAP:9746
TS23: renal vasculature Absent GUDMAP:9746
TS23: renal vesicle Ambiguous GUDMAP:9746
TS23: comma-shaped body Ambiguous GUDMAP:9746
TS23: anlage of loop of Henle of cortical renal tubule Ambiguous GUDMAP:9746 expression in distal tubule segment may extend into a portion of the anlage of loop of Henle
TS23: perihilar interstitium Ambiguous GUDMAP:9746 weak expression
TS23: cortical renal tubule of capillary loop nephron group Present GUDMAP:9746
TS23: early distal tubule of capillary loop nephron Present GUDMAP:9746
TS23: renal connecting tubule of capillary loop nephron Present GUDMAP:9746
TS23: cortical renal tubule of maturing nephron group Present GUDMAP:9746
TS23: early distal tubule of maturing nephron Present GUDMAP:9746
TS23: renal connecting tubule of maturing nephron Present GUDMAP:9746
Specimen GUDMAP:9747: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urothelium of ureter Absent GUDMAP:9747
TS23: ureteral mesenchyme outer layer Absent GUDMAP:9747
TS23: ureter Ambiguous GUDMAP:9747
TS23: ureteral mesenchyme Ambiguous GUDMAP:9747 possible weak expression
TS23: ureteral smooth muscle layer Ambiguous GUDMAP:9747 possible weak expression
Specimen GUDMAP:9748: postnatal adult (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: metanephros Absent GUDMAP:9748
Specimen GUDMAP:9749: postnatal adult (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: ureter Absent GUDMAP:9749
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01/06/2026
MGI 6.24 		The Jackson Laboratory