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Gene Expression Data
Assay Details
Assay
Reference: J:77812 Perriton CL, et al., Sonic hedgehog signaling from the urethral epithelium controls external genital development. Dev Biol. 2002 Jul 1;247(1):26-46
Assay type: RNA in situ
MGI Accession ID: MGI:5505591
Gene symbol: Hoxd13
Gene name: homeobox D13
Probe: Hoxd13 probe20
Visualized with: Alkaline phosphatase
Results
Specimen 3E E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: genitourinary system Present Regionally restricted 3E E10.5 Expression throughout cloaca and in prospective genital regions.
Specimen 3E E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: genital tubercle Strong 3E E11.5
Specimen 3E E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: genital tubercle Strong 3E E12.5
Specimen 3E E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: genital tubercle Strong 3E E13.5
Specimen 3E E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: genital tubercle Strong 3E E14.5
Specimen 4P: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: genital tubercle Strong Regionally restricted 4P Strong expression throughout genital tubercle, weakest proximally.
Specimen 4Q: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: genital tubercle Strong Regionally restricted 4Q Strong expression throughout genital tubercle, weakest proximally.
Specimen 6Q: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: genital tubercle Strong Widespread 6Q Expression throughout genital tubercle.
Specimen 6R: embryonic day 11.5; Shhtm1Chg/Shhtm1Chg (more )
Structure Level Pattern Image Note
TS19: genitourinary system Strong Regionally restricted 6R Strong expression anterior to and on either side of cloacal membrane, although in a smaller domain than in wild-type. Expression resembled normal pattern of expression at E10.5.
Specimen 6S: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: genital tubercle Present Widespread 6S Expression throughout genital tubercle.
Specimen 6T: embryonic day 13.5; Shhtm1Chg/Shhtm1Chg (more )
Structure Level Pattern Image Note
TS21: genitourinary system Present Widespread 6T Expression throughout genital region anterior to cloacal opening.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory