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Gene Expression Data
Assay Details
Assay
Reference: J:25268 Kimura Y, et al., Cadherin-11 expressed in association with mesenchymal morphogenesis in the head, somite, and limb bud of early mouse embryos. Dev Biol. 1995 May;169(1):347-58
Assay type: RNA in situ
MGI Accession ID: MGI:5492111
Gene symbol: Cdh11
Gene name: cadherin 11
Probe: pSP73-11
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 4A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 4A Expressed in the head mesoderm and the mesodermal layers of the tail. The paraxial mesoderm in the trunk region was devoid of expression.
TS11: embryo ectoderm Absent 4A
TS11: future spinal cord neural plate Ambiguous 4A Little expressed.

Specimen 4B: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 4B Expressed in the head mesoderm and the mesodermal layers of the tail. The paraxial mesoderm in the trunk region was devoid of expression.
TS11: embryo ectoderm Absent 4B

Specimen 4C: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: head mesenchyme Strong Non-Uniform 4C Expressed in most of the mesenchymal cells, although the staining intensity varied with the subregion.
TS12: somite Present 4C
TS12: future spinal cord neural plate Ambiguous 4C Little expressed.

Specimen 5A: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: 1st branchial arch mandibular component mesenchyme Strong 5A
TS14: 1st branchial arch maxillary component mesenchyme Strong 5A
TS14: future spinal cord neural fold Weak Regionally restricted 5A Expressed in the ridges.
TS14: somite Present Regionally restricted 5A Expressed at the caudal region of the newly condensing mesenchymal cells. Expressed in the entire somite when the closed epithelial vesicles were formed. At later stages, the dermomyotome gradually lost expression.
TS14: notochord Absent 5A

Specimen 5C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 1st branchial arch mandibular component mesenchyme Strong 5C
TS15: 1st branchial arch maxillary component mesenchyme Strong 5C
TS15: somite Present Regionally restricted 5C Expressed at the caudal region of the newly condensing mesenchymal cells. Expressed in the entire somite when the closed epithelial vesicles were formed. At later stages, the dermomyotome gradually lost expression.
TS15: forelimb bud ectoderm Absent 5C
TS15: notochord Absent 5C
TS15: forelimb bud mesenchyme Present Regionally restricted 5C Expressed in the distal region.

Specimen 5E: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: 1st branchial arch mandibular component mesenchyme Strong 5E
TS18: 1st branchial arch maxillary component mesenchyme Strong 5E
TS18: somite Present Regionally restricted 5E Expressed at the caudal region of the newly condensing mesenchymal cells. Expressed in the entire somite when the closed epithelial vesicles were formed. At later stages, the dermomyotome gradually lost expression.
TS18: notochord Absent 5E

Specimen 6A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 6A Expressed in the head mesoderm and the mesodermal layers of the tail.
TS11: embryo ectoderm Absent 6A

Specimen 6B: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: head mesenchyme Strong Non-Uniform 6B Expressed in most of the mesenchymal cells, although the staining intensity varied with the subregion.
TS14: neural tube roof plate Present 6B Expressed in the dorsal midline in the posterior trunk region.

Specimen 6C: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: optic eminence mesenchyme Present Regionally restricted 6C Expressed in the periocular mesenchyme in the outer region of the optic vesicle.

Specimen 6D: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS15: otocyst Present 6D

Specimen 6E: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS15: neural tube roof plate Present 6E Expressed in the dorsal midline in the posterior trunk region.
TS15: trigeminal preganglion Absent 6E No expression in the cranial and dorsal ganglion, presumably the trigeminal ganglion.

Specimen 6F: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: forelimb bud mesenchyme Present Graded 6F Expressed in a distal-proximal gradient with an irregular shape along the anterior-posterior axis.
TS16: forelimb bud apical ectodermal ridge Absent 6F
TS16: forelimb bud ectoderm Absent 6F

Specimen 7A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: somite Present Regionally restricted 7A Expressed at the caudal region of the newly condensing mesenchymal cells. Expressed in the entire somite when the closed epithelial vesicles were formed. At later stages, the dermomyotome gradually lost expression.

Specimen 7B: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: somite Present Regionally restricted 7B Expressed at the caudal region of the newly condensing mesenchymal cells.

Specimen 7C: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: dermomyotome Absent 7C
TS14: sclerotome Present 7C

Specimen 7D: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: sclerotome Present Non-Uniform 7D Expressed in the cells that had started migration. Cells at both cranial and caudal edges expressed more than those in the middle region.

Specimen 9A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Present Regionally restricted 9A Expressed in the distal region.
TS15: forelimb bud ectoderm Absent 9A

Specimen 9B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: forelimb bud mesenchyme Present Graded 9B Expressed in a distal-proximal gradient with an irregular shape along the anterior-posterior axis.

Specimen 9C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb mesenchyme Strong Regionally restricted 9C Expressed in the peripheral areas, extending into deeper layers at each interdigital region.

Specimen 9D: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hindlimb mesenchyme Strong Regionally restricted 9D Expressed in the peripheral areas.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory