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Gene Expression Data
Assay Details
Assay
Reference: J:36483 Flenniken AM, et al., Distinct and overlapping expression patterns of ligands for Eph-related receptor tyrosine kinases during mouse embryogenesis. Dev Biol. 1996 Nov 1;179(2):382-401
Assay type: RNA in situ
MGI Accession ID: MGI:5490816
Gene symbol: Efna5
Gene name: ephrin A5
Probe: AL-1/RAGS cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3C: embryonic day 8.0 (more )
Note: 6 somites.
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 3C Expression is in the presumptive diencephalon.
TS12: future midbrain Present 3C
TS12: optic sulcus Present 3C
Specimen 3D: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: eye Present 3D
TS14: future midbrain Present 3D
TS14: prosencephalon Present Regionally restricted 3D Expression is in the rostral forebrain.
TS14: future diencephalon Present Regionally restricted 3D Expression is in a dorsal stripe.
TS14: branchial arch Weak 3D
TS14: somite Weak 3D
TS14: future hindbrain Weak Regionally restricted 3D There is an expression free region adjacent to rhombomere 3 and ventral to the otic vesicle.
Specimen 4A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch ectoderm Present 4A
Specimen not shown E10: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future midbrain Present Graded Anterior to posterior gradient of expression.
TS16: limb Present
Specimen 8H: embryonic day 12.5-13.0 (more )
Structure Level Pattern Image Note
TS21: limb Present Regionally restricted 8H Expression is proximal.
TS21: foot Weak Regionally restricted 8H Expression is around the forming digits.
TS21: hand Weak Regionally restricted 8H Expression is around the forming digits.
Specimen not shown E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: limb interdigital region Present
Specimen 9C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present Regionally restricted 9C Expression is in a small patch.
Specimen 9D: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: basal columns Strong Regionally restricted 9D Expression is in a subset of cells.
TS21: alar columns Weak 9D
Specimen 9E: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: basal columns Present 9E
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory