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Gene Expression Data
Assay Details
Assay
Reference: J:32188 Vainio S, et al., Transient expression of syndecan in mesenchymal cell aggregates of the embryonic kidney. Dev Biol. 1992 Aug;152(2):221-32
Assay type: RNA in situ
MGI Accession ID: MGI:5485356
Gene symbol: Sdc1
Gene name: syndecan 1
Probe: Sdc1 cDNA1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: The average size of transcripts was reduced to 100-150 bases by limited alkaline hydrolysis.
Results
Specimen 1a: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: metanephric mesenchyme Present Regionally restricted 1a Expression is in mesenchyme around the ureteric bud and in peripheral mesenchymal cells.
Specimen 1c/d: embryonic day 12.5 (more )
Note: brightfield/darkfield pair
Structure Level Pattern Image Note
TS20: mesenchyme of metanephros Very strong Regionally restricted 1c/d Expression is in aggregating mesenchyme, weak in undifferentiated mesenchyme.
Specimen 1e: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: mesenchyme of metanephros Very strong Regionally restricted 1e Expression is in aggregates around the ureter, absent in mesenchymal cells of the stroma.
TS23: comma-shaped body Very strong 1e
TS23: s-shaped body Very strong 1e
Specimen 1f: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: comma-shaped body Present 1f
TS23: early tubule Present 1f
TS23: ureter Present 1f
Specimen 1g: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: renal cortex Present 1g
Specimen 1h: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: ureter Very strong Regionally restricted 1h Expression is in the stratifying epithelium.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory