Gene Expression Data
Assay Details
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Assay
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Reference:
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J:43579
Kitamura K, et al., Expression patterns of Brx1 (Rieg gene), Sonic hedgehog, Nkx2.2, Dlx1 and Arx during zona limitans intrathalamica and embryonic ventral lateral geniculate nuclear formation. Mech Dev. 1997 Sep;67(1):83-96
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5440641
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Gene symbol:
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Arx
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Gene name:
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aristaless related homeobox
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Probe:
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Arx cDNA
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
4G:
embryonic day 11.5
(more  )
Specimen
4G:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: diencephalon |
Present |
Regionally restricted |
4G
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The dorsal-most expression in the ventral thalamus was found to take the form of a dorsolateralward band.
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Specimen
4I/J:
embryonic day 11.5
(more )
Specimen
4I/J:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: diencephalon |
Present |
Regionally restricted |
4J
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4I
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The dorsal-most expression overlapped with Brx1 (Pitx2) in the zona limitans intrathalamica.
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Specimen
5C/D:
embryonic day 13.5
(more )
Specimen
5C/D:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: diencephalon |
Present |
Regionally restricted |
5C/D
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Expression was detected in the zona limitans intrathalamica as it extends toward the lateral surface of the diencephalic wall. Expression was in a broad path containing spindle-shaped cells.
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Specimen
6D:
embryonic day 14.5
(more )
Specimen
6D:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: thalamus |
Present |
Regionally restricted |
6D
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Expression was detected in the early embryonic ventral lateral geniculate nucleus. Expression was conserved primarily along the anterioposterior axis.
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| TS22: diencephalon |
Present |
Regionally restricted |
6D
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Expression was detected in the zona limitans intrathalamica near the lateral surface of the diencephalic wall.
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Specimen
6H:
embryonic day 14.5
(more )
Specimen
6H:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: thalamus |
Present |
Regionally restricted |
6H
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Expression was detected in the early embryonic ventral lateral geniculate nucleus. Expression was conserved primarily along the anterioposterior axis.
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| TS22: diencephalon |
Present |
Regionally restricted |
6H
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Expression was detected in the zona limitans intrathalamica near the lateral surface of the diencephalic wall.
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Specimen
6L/L'/L":
embryonic day 14.5
(more )
Specimen
6L/L'/L":
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: thalamus |
Present |
Regionally restricted |
6L
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6U
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6S
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6L'/L"
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6T
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Expression was detected in the early embryonic ventral lateral geniculate nucleus. Expression was conserved primarily along the anterioposterior axis.
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| TS22: diencephalon |
Present |
Regionally restricted |
6L
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6L'/L"
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6U
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6S
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6T
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Expression was detected in the zona limitans intrathalamica near the lateral surface of the diencephalic wall.
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Specimen
6P:
embryonic day 14.5
(more )
Specimen
6P:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: thalamus |
Present |
Regionally restricted |
6P
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Expression was detected in the early embryonic ventral lateral geniculate nucleus. Expression was conserved primarily along the anterioposterior axis.
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| TS22: diencephalon |
Present |
Regionally restricted |
6P
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Expression was detected in the zona limitans intrathalamica near the lateral surface of the diencephalic wall.
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Specimen
7B/B':
embryonic day 18.0
(more )
Specimen
7B/B':
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 18.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: thalamus |
Present |
Regionally restricted |
7B/B'
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Sections were taken at different coronal levels of embryonic ventral lateral geniculate nucleus. Expression was seen at level 2 (this section), but not 3. Expression was seen in the external medullary lamina at levels 1 and 2.
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Analysis Tools