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Gene Expression Data
Assay Details
Assay
Reference: J:3293 Reaume AG, et al., Expression analysis of a Notch homologue in the mouse embryo. Dev Biol. 1992 Dec;154(2):377-87
Assay type: RNA in situ
MGI Accession ID: MGI:5439156
Gene symbol: Notch1
Gene name: notch 1
Probe: Notch cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen Not shown: embryonic day 6.0 (more )
Note: Pre and early streak stage embryos.
Structure Level Pattern Image Note
TS9: embryo Absent

Specimen 3A: embryonic day 7.0 (more )
Note: This is a midstreak stage embryo.
Structure Level Pattern Image Note
TS10: embryo mesoderm Present Regionally restricted 3A Highest expression is found in the posterior mesoderm adjacent to the primitive streak.
TS10: primitive streak Present 3A

Specimen 3B: embryonic day 7.25 (more )
Note: This is an early headfold stage embryo.
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 3B Expression is detected only in the posterior 2/3 of the axial mesoderm. No expression was seen in midline tissues anterior to the node.
TS11: node Absent 3B

Specimen 3C: embryonic day 7.5 (more )
Note: This is a late headfold stage embryo.
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 3C There is a sharp anterior boundary of expression. Expression is strongest adjacent to the anterior limit of expression.
TS11: embryo ectoderm Absent 3C

Specimen 3D: embryonic day 7.5 (more )
Note: This is a late headfold stage embryo.
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 3D Expression is just anterior to the node, in two bands on either side of the midline, at right angles to the anterior-posterior axis.
TS11: embryo ectoderm Absent 3D

Specimen 3E: embryonic day 8.0 (more )
Note: This is an early somite stage embryo.
Structure Level Pattern Image Note
TS12: trunk unsegmented mesenchyme Present Regionally restricted 3E Expression is present in a somite-sized domain just posterior to the most recently formed somite.

Specimen Not shown: embryonic day 8.0 (more )
Note: 1-4 somites.
Structure Level Pattern Image Note
TS12: allantois Present Scattered
TS12: heart Present Regionally restricted Expression is present in the endothelial cells.
TS12: dorsal aorta Present

Specimen Not shown: embryonic day 8.0 (more )
Note: 6 somite stage embryos.
Structure Level Pattern Image Note
TS12: future midbrain Present Expression is present in the lateral portions of the neural plate.
TS12: future hindbrain Present Regionally restricted Expression is present in the lateral portions of the neural plate at the level of the anterior hindbrain.

Specimen 4A: embryonic day 8.5 (more )
Note: This is an 11 somite stage embryo.
Structure Level Pattern Image Note
TS13: trunk unsegmented mesenchyme Present Regionally restricted 4A Expression is present in a somite-sized domain.
TS13: trunk somite Present Regionally restricted 4A Expression is present medially in some anterior somites.
TS13: embryo ectoderm Present Regionally restricted 4A Expression is present in the trigeminal placodes.
TS13: otic placode Present 4A

Specimen Not shown: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: trunk unsegmented mesenchyme Present Widespread In contrast to what was seen earlier, strong expression is seen in most of the presomitic mesoderm.

Specimen 4B/C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: tail Strong 4B
TS15: future spinal cord Present Regionally restricted 4B Expression is present in the dorsalmost spinal cord.
TS15: future hindbrain lateral wall Present Regionally restricted 4B Expression is present cells adjacent to the roof plate.
TS15: embryo ectoderm Present Regionally restricted 4B , 4C Expression is present in the trigeminal, geniculate, petrosum, and nodose placodes.
TS15: otocyst Present 4C , 4B

Specimen Not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: somite Present Non-Uniform Expression is present in the medial or medial and posterior portions of somites, depending on axial level.
TS15: olfactory placode Present
TS15: dorsal root ganglion Present Expression is present in cells immediately lateral to the spinal cord, presumably the neural crest precursors of the dorsal root ganglia.
TS15: arterial system Present Regionally restricted Expression is present in the intersegmental arteries.
TS15: mesonephros Present Expression is present in the mesonephric kidney.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/30/2025
MGI 6.24
The Jackson Laboratory