About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423345
Gene symbol: Atp6v1h
Gene name: ATPase, H+ transporting, lysosomal V1 subunit H
Probe: EH842 probe 783
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EH842; Specimen C2496: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C2496_4_3C
TS22: central nervous system Strong Regionally restricted Embryo_C2496_4_3C
TS22: telencephalon Strong Regionally restricted Embryo_C2496_4_3C
TS22: cerebral cortex Strong Regionally restricted Embryo_C2496_4_3C
TS22: neocortex Moderate Regionally restricted Embryo_C2496_4_3C
TS22: olfactory cortex Strong Regionally restricted Embryo_C2496_4_3C
TS22: main olfactory bulb Strong Regionally restricted Embryo_C2496_4_3C
TS22: piriform cortex Absent
TS22: hippocampus Weak Regionally restricted Embryo_C2496_4_3C
TS22: basal ganglia Absent
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Absent
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Regionally restricted Embryo_C2496_4_3D
TS22: thalamus Weak Regionally restricted Embryo_C2496_4_3D
TS22: hypothalamus Weak Regionally restricted Embryo_C2496_4_3D
TS22: midbrain Moderate Regionally restricted Embryo_C2496_4_3C
TS22: pretectum Weak Ubiquitous Embryo_C2496_4_3C
TS22: superior colliculus Moderate Regionally restricted Embryo_C2496_4_3C
TS22: inferior colliculus Moderate Regionally restricted Embryo_C2496_4_3C
TS22: midbrain tegmentum Weak Regionally restricted Embryo_C2496_4_3C
TS22: hindbrain Moderate Regionally restricted Embryo_C2496_4_3C
TS22: cerebellum Weak Regionally restricted Embryo_C2496_4_4B
TS22: pons Moderate Regionally restricted Embryo_C2496_4_3C
TS22: medulla oblongata Moderate Regionally restricted Embryo_C2496_4_3B
TS22: spinal cord Moderate Regionally restricted Embryo_C2496_4_4B
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Strong Ubiquitous Embryo_C2496_4_3A
TS22: cranial ganglion Strong Ubiquitous Embryo_C2496_4_3A
TS22: dorsal root ganglion Strong Regionally restricted Embryo_C2496_4_3C
TS22: eye Moderate Regionally restricted Embryo_C2496_4_1A
TS22: retina Moderate Regionally restricted Embryo_C2496_4_1A
TS22: lens Absent
TS22: cornea Weak Regionally restricted Embryo_C2496_4_1A
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_C2496_4_3C
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C2496_4_3C
TS22: ear Moderate Regionally restricted Embryo_C2496_4_3A
TS22: inner ear Moderate Regionally restricted Embryo_C2496_4_3A
TS22: cochlea Moderate Regionally restricted Embryo_C2496_4_3A
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C2496_4_2C
TS22: middle ear Weak Regionally restricted Embryo_C2496_4_1A
TS22: alimentary system Weak Regionally restricted Embryo_C2496_4_4A Expression was weak in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_C2496_4_4A
TS22: salivary gland Absent
TS22: tongue Weak Regionally restricted Embryo_C2496_4_4C
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Weak Regionally restricted Embryo_C2496_4_4B
TS22: stomach Absent
TS22: liver Absent
TS22: respiratory system Moderate Regionally restricted Embryo_C2496_4_3C
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_C2496_4_3C
TS22: urinary system Weak Regionally restricted Embryo_C2496_4_5C Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C2496_4_5C
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Weak Regionally restricted Embryo_C2496_4_2C
TS22: genital tubercle Absent
TS22: gonad Weak Regionally restricted Embryo_C2496_4_2C
TS22: gland Weak Regionally restricted Embryo_C2496_4_4A Expression was weak in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Weak Ubiquitous Embryo_C2496_4_4A
TS22: pancreas Weak Regionally restricted Embryo_C2496_4_3B
TS22: adrenal gland Weak Regionally restricted Embryo_C2496_4_5A
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_C2496_4_4A
TS22: cranium Weak Regionally restricted Embryo_C2496_4_2B Expression was weak in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Weak Regionally restricted Embryo_C2496_4_4A
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Weak Regionally restricted Embryo_C2496_4_6B
TS22: skin Absent
TS22: hair Weak Regionally restricted Embryo_C2496_4_6B
TS22: vibrissa follicle Weak Regionally restricted Embryo_C2496_4_6B Expression was weak in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
10/22/2024
MGI 6.24
The Jackson Laboratory