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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423197
Gene symbol: Acad9
Gene name: acyl-Coenzyme A dehydrogenase family, member 9
Probe: EN446 probe 377
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EN446; Specimen N295: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_N295_3_1A
TS22: central nervous system Strong Regionally restricted Embryo_N295_3_3B
TS22: telencephalon Strong Regionally restricted Embryo_N295_3_3B
TS22: cerebral cortex Strong Regionally restricted Embryo_N295_3_3B
TS22: neocortex Strong Regionally restricted Embryo_N295_3_3B
TS22: olfactory cortex Strong Regionally restricted Embryo_N295_3_3B
TS22: main olfactory bulb Strong Regionally restricted Embryo_N295_3_3B
TS22: piriform cortex Moderate Ubiquitous Embryo_N295_3_2A
TS22: hippocampus Moderate Ubiquitous Embryo_N295_3_3B
TS22: basal ganglia Moderate Ubiquitous Embryo_N295_3_3B
TS22: corpus striatum Moderate Ubiquitous Embryo_N295_3_2A Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Ubiquitous Embryo_N295_3_3B
TS22: amygdala Moderate Ubiquitous Embryo_N295_3_2A
TS22: telencephalon septum Moderate Ubiquitous Embryo_N295_3_3B
TS22: pallidum Moderate Ubiquitous Embryo_N295_3_3B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Ubiquitous Embryo_N295_3_3B
TS22: thalamus Moderate Ubiquitous Embryo_N295_3_3B
TS22: hypothalamus Moderate Ubiquitous Embryo_N295_3_3B
TS22: midbrain Strong Regionally restricted Embryo_N295_3_3C
TS22: pretectum Moderate Ubiquitous Embryo_N295_3_3B
TS22: superior colliculus Strong Regionally restricted Embryo_N295_3_3C
TS22: inferior colliculus Moderate Ubiquitous Embryo_N295_3_3C
TS22: midbrain tegmentum Moderate Ubiquitous Embryo_N295_3_3C
TS22: hindbrain Moderate Ubiquitous Embryo_N295_3_3B
TS22: cerebellum Moderate Ubiquitous Embryo_N295_3_3C
TS22: pons Moderate Ubiquitous Embryo_N295_3_3B
TS22: medulla oblongata Moderate Ubiquitous Embryo_N295_3_3B
TS22: spinal cord Moderate Ubiquitous Embryo_N295_3_3C
TS22: choroid plexus Moderate Regionally restricted Embryo_N295_3_3B
TS22: meninges Strong Ubiquitous Embryo_N295_3_1A
TS22: peripheral nervous system Strong Ubiquitous Embryo_N295_3_2D
TS22: cranial ganglion Strong Ubiquitous Embryo_N295_3_2A
TS22: dorsal root ganglion Strong Ubiquitous Embryo_N295_3_2D
TS22: eye Strong Regionally restricted Embryo_N295_3_1A
TS22: retina Strong Ubiquitous Embryo_N295_3_1A
TS22: lens Strong Regionally restricted Embryo_N295_3_1A
TS22: cornea Strong Ubiquitous Embryo_N295_3_1A
TS22: optic nerve Moderate Ubiquitous Embryo_N295_3_2C
TS22: nose Moderate Ubiquitous Embryo_N295_3_2D
TS22: olfactory epithelium Moderate Ubiquitous Embryo_N295_3_2D
TS22: ear Moderate Ubiquitous Embryo_N295_3_1A
TS22: inner ear Moderate Ubiquitous Embryo_N295_3_1A
TS22: cochlea Moderate Ubiquitous Embryo_N295_3_2D
TS22: inner ear labyrinth Moderate Ubiquitous Embryo_N295_3_2C
TS22: middle ear Moderate Ubiquitous Embryo_N295_3_1A
TS22: alimentary system Strong Regionally restricted Embryo_N295_3_1A Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_N295_3_2D
TS22: salivary gland Moderate Ubiquitous Embryo_N295_3_2D
TS22: tongue Moderate Ubiquitous Embryo_N295_3_4A
TS22: tooth Moderate Ubiquitous Embryo_N295_3_3B
TS22: palatal shelf Strong Ubiquitous Embryo_N295_3_4A
TS22: esophagus Moderate Regionally restricted Embryo_N295_3_3D
TS22: stomach Strong Regionally restricted Embryo_N295_3_1D
TS22: liver Strong Ubiquitous Embryo_N295_3_1A
TS22: respiratory system Moderate Ubiquitous Embryo_N295_3_4A
TS22: pharynx Moderate Ubiquitous Embryo_N295_3_4A
TS22: larynx Moderate Ubiquitous Embryo_N295_3_4A
TS22: trachea Moderate Ubiquitous Embryo_N295_3_4A
TS22: main bronchus Moderate Ubiquitous Embryo_N295_3_2D
TS22: lung Moderate Ubiquitous Embryo_N295_3_2D
TS22: urinary system Strong Regionally restricted Embryo_N295_3_3C Expression was strong in the genito-urinary system.
TS22: metanephros Moderate Ubiquitous Embryo_N295_3_2D
TS22: ureter Weak Ubiquitous Embryo_N295_3_3D
TS22: bladder Moderate Ubiquitous Embryo_N295_3_3D
TS22: urethra Weak Ubiquitous Embryo_N295_3_3D
TS22: reproductive system Strong Regionally restricted Embryo_N295_3_3C
TS22: genital tubercle Strong Regionally restricted Embryo_N295_3_3C
TS22: gonad Moderate Ubiquitous Embryo_N295_3_5C
TS22: gland Moderate Ubiquitous Embryo_N295_3_3C Expression was detected in the endocrine system.
TS22: thyroid gland Moderate Ubiquitous Embryo_N295_3_3C
TS22: pituitary gland Moderate Ubiquitous Embryo_N295_3_3C
TS22: pancreas Moderate Ubiquitous Embryo_N295_3_2C
TS22: adrenal gland Moderate Ubiquitous Embryo_N295_3_2D
TS22: cardiovascular system Moderate Regionally restricted Embryo_N295_3_3D
TS22: heart Moderate Ubiquitous Embryo_N295_3_3D
TS22: heart atrium Moderate Ubiquitous Embryo_N295_3_3D
TS22: heart ventricle Moderate Ubiquitous Embryo_N295_3_3D
TS22: blood vessel Moderate Regionally restricted Embryo_N295_3_3C
TS22: hemolymphoid system Moderate Ubiquitous Embryo_N295_3_3D Expression was detected in the immune system.
TS22: spleen primordium Moderate Ubiquitous Embryo_N295_3_1D
TS22: thymus primordium Moderate Ubiquitous Embryo_N295_3_3D
TS22: appendicular skeleton Moderate Regionally restricted Embryo_N295_3_1B Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Ubiquitous Embryo_N295_3_1D
TS22: face Moderate Ubiquitous Embryo_N295_3_3C Expression was detected in the face/soft tissues.
TS22: facial bone primordium Moderate Ubiquitous Embryo_N295_3_3C
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_N295_3_1A
TS22: tail Strong Regionally restricted Embryo_N295_3_3C
TS22: forelimb Strong Regionally restricted Embryo_N295_3_1A
TS22: hindlimb Strong Regionally restricted Embryo_N295_3_1A
TS22: integumental system Strong Regionally restricted Embryo_N295_3_1A
TS22: skin Strong Ubiquitous Embryo_N295_3_1A
TS22: hair Moderate Ubiquitous Embryo_N295_3_2A
TS22: vibrissa follicle Moderate Ubiquitous Embryo_N295_3_2A Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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