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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421134
Gene symbol: Eomes
Gene name: eomesodermin
Probe: MH598 probe 391
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH598; Specimen C1294: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1294_3_3A
TS22: central nervous system Strong Regionally restricted Embryo_C1294_3_3A
TS22: telencephalon Strong Regionally restricted Embryo_C1294_3_2C
TS22: cerebral cortex Strong Regionally restricted Embryo_C1294_3_2C
TS22: neocortex Strong Regionally restricted Embryo_C1294_3_2C
TS22: olfactory cortex Strong Regionally restricted Embryo_C1294_3_2C
TS22: main olfactory bulb Strong Regionally restricted Embryo_C1294_3_2C
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_C1294_3_2C
TS22: basal ganglia Moderate Regionally restricted Embryo_C1294_3_1C
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Moderate Regionally restricted Embryo_C1294_3_1C
TS22: telencephalon septum Absent
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1294_3_3B
TS22: thalamus Strong Regionally restricted Embryo_C1294_3_3B
TS22: hypothalamus Moderate Regionally restricted Embryo_C1294_3_3B
TS22: midbrain Moderate Regionally restricted Embryo_C1294_3_3A
TS22: pretectum Weak Regionally restricted Embryo_C1294_3_3B
TS22: superior colliculus Weak Regionally restricted Embryo_C1294_3_3C
TS22: inferior colliculus Weak Regionally restricted Embryo_C1294_3_3A
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1294_3_3A
TS22: hindbrain Moderate Regionally restricted Embryo_C1294_3_3A
TS22: cerebellum Moderate Regionally restricted Embryo_C1294_3_3A
TS22: pons Absent
TS22: medulla oblongata Absent
TS22: spinal cord Absent
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Strong Regionally restricted Embryo_C1294_3_6C
TS22: retina Strong Regionally restricted Embryo_C1294_3_6C
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Absent Expression was not detected in the digestive system.
TS22: respiratory system Absent
TS22: urinary system Absent Expression was not detected in the genito-urinary system.
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: cardiovascular system Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Absent
TS22: forelimb Absent
TS22: hindlimb Moderate Regionally restricted Embryo_C1294_3_6A
TS22: integumental system Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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