Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:80025
Wallis D, et al., The zinc finger transcription factor Gfi1, implicated in lymphomagenesis, is required for inner ear hair cell differentiation and survival. Development. 2003 Jan;130(1):221-32
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:5302549
|
Gene symbol:
|
Gfi1
|
Gene name:
|
growth factor independent 1 transcription repressor
|
Probe:
|
Gfi1 probe1
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
|
Results
|
Specimen
1A:
embryonic day 12.5
(more )
Specimen
1A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1B:
embryonic day 18.5
(more )
Specimen
1B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: retina |
Present |
Regionally restricted |
1B
|
Expression is primarily present in the retinal ganglion cell layer.
|
Specimen
1D:
embryonic day 16.5
(more )
Specimen
1D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: skin |
Present |
Single cells |
1D
|
Expression is present in cells around the shaft of whiskers; they are thought to be Merkel cells.
|
Specimen
1E:
embryonic day 15.5
(more )
Specimen
1E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: skin |
Present |
Single cells |
1E
|
Expressing cells are located under the touch domes; they are believed to be Merkel cells.
|
Specimen
1G:
embryonic day 16.5
(more )
Specimen
1G:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1H:
embryonic day 18.5
(more )
Specimen
1H:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: tongue epithelium |
Present |
Regionally restricted |
1H
|
Expression is present in the dorsal eptihelium where taste papilla develop.
|
Specimen
1I:
embryonic day 15.5
(more )
Specimen
1I:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: lung |
Present |
Non-Uniform |
1I
|
Expression is present in clusters of cells believed to be neuroepithelial precursor cells.
|
Specimen
1K:
embryonic day 15.5
(more )
Specimen
1K:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2A:
embryonic day 12.5
(more )
Specimen
2A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2B:
embryonic day 14.5
(more )
Specimen
2B:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: saccule |
Present |
Regionally restricted |
2B
|
Expression is present in the saccule, but high levels of expression are not yet visible in the cochlea. Expression is present in positions where the newly developed hair cells are believed to be.
|
TS22: utricle |
Present |
|
2B
|
Expression is present in the developing vestibule organs in positions where the newly developed hair cells are believed to be.
|
Specimen
2C:
embryonic day 16.5
(more )
Specimen
2C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 16.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
2D:
embryonic day 18.5
(more )
Specimen
2D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4A:
embryonic day 12.5
(more )
Specimen
4A:
(close )
Genetic Background:
|
involves: 129 * C57BL/6J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4B:
(close )
Genetic Background:
|
involves: 129 * C57BL/6J
|
Mutant Allele(s):
|
Atoh1tm2Hzo/Atoh1tm2Hzo
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4E:
embryonic day 18.5
(more )
Specimen
4E:
(close )
Genetic Background:
|
involves: 129 * C57BL/6J
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4F:
(close )
Genetic Background:
|
involves: 129 * C57BL/6J
|
Mutant Allele(s):
|
Atoh1tm2Hzo/Atoh1tm2Hzo
|
Age:
|
embryonic day 18.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS26: cochlea |
Absent |
|
4F
|
Lack of expression is assumed to be due to the loss of hair cells in the mutant.
|
TS26: saccule |
Absent |
|
4F
|
Lack of expression is assumed to be due to the loss of hair cells in the mutant.
|
TS26: utricle |
Absent |
|
4F
|
Lack of expression is assumed to be due to the loss of hair cells in the mutant.
|
|