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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4888359
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Probe: MH768 probe 669
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S8: embryonic day 14.5 (more )
Note: This data is from euxassay_018175.
Structure Level Pattern Image Note
TS23: neocortex Absent euxassay_018175_12
TS23: hippocampus Absent euxassay_018175_12
TS23: corpus striatum Absent euxassay_018175_12
TS23: telencephalon septum Weak euxassay_018175_12
TS23: thalamus Strong euxassay_018175_12
TS23: hypothalamus Moderate euxassay_018175_12
TS23: pretectum Absent euxassay_018175_12
TS23: superior colliculus Absent euxassay_018175_12
TS23: inferior colliculus Absent euxassay_018175_12
TS23: midbrain tegmentum Absent euxassay_018175_12
TS23: cerebellum Strong euxassay_018175_12
TS23: spinal cord Weak euxassay_018175_12
TS23: skin Weak euxassay_018175_12
TS23: lung Weak euxassay_018175_12
TS23: metanephros Absent euxassay_018175_12
TS23: liver Absent euxassay_018175_12
TS23: thyroid gland Absent euxassay_018175_12
TS23: pituitary gland Absent euxassay_018175_12
TS23: pancreas Absent euxassay_018175_12
TS23: adrenal gland Absent euxassay_018175_12
TS23: heart Absent euxassay_018175_12
TS23: thymus primordium Weak euxassay_018175_12
TS23: vertebral axis musculature Absent euxassay_018175_12
TS23: axial skeleton Weak euxassay_018175_12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/30/2025
MGI 6.24 		The Jackson Laboratory