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Gene Expression Data
Assay Details
Assay
Reference: J:62086 Zarbalis K, et al., Expression domains of murine ephrin-A5 in the pituitary and hypothalamus. Mech Dev. 2000 May;93(1-2):165-8
Assay type: RNA in situ
MGI Accession ID: MGI:4845869
Gene symbol: Efna5
Gene name: ephrin A5
Probe: ephrinA5 cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen Not shown, E8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain neural fold Present

Specimen Not shown, E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial arch ectoderm Present
TS17: head Present Regionally restricted Expression is in facial ectoderm.
TS17: head mesenchyme Present Regionally restricted Expression is in mesenchyme in the face.

Specimen Not shown, E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: embryo ectoderm Present Regionally restricted Expression is in two lateral stripes along the backline in the dorsal ectoderm.
TS19: embryo mesenchyme Present Regionally restricted Expression is in mesenchyme surrounding the dorsal root ganglia.

Specimen 1A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: mandibular process mesenchyme Present 1A
TS20: maxillary process mesenchyme Present 1A
TS20: skin Present Regionally restricted 1A Expression is in two lateral stripes along the backline in the dorsal ectoderm.
TS20: embryo mesenchyme Present Regionally restricted 1A Expression is in mesenchyme surrounding the dorsal root ganglia.

Specimen 1B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: mandibular process mesenchyme Present 1B
TS20: maxillary process mesenchyme Present 1B

Specimen 1C: embryonic day 12.5 (more )
Note: The tissues were either embedded in paraffin or fresh frozen and sectioned.
Structure Level Pattern Image Note
TS20: hypothalamus Present 1C
TS20: nasal septum mesenchyme Present 1C
TS20: mandible primordium Present Regionally restricted 1C Expression is in a proximoventral domain in the mandible.
TS20: axial skeleton Present Regionally restricted 1C Expression is in the intervertebral discs.
TS20: tail mesenchyme Present Regionally restricted 1C Expression is surrounding the somites.

Specimen 1D: embryonic day 12.5 (more )
Note: the tissues were either embedded in paraffin or fresh frozen and sectioned.
Structure Level Pattern Image Note
TS20: hypothalamus Present 1D
TS20: remnant of Rathke's pouch Absent 1D


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory