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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4829328
Gene symbol: Zfp647
Gene name: zinc finger protein 647
Probe: MGC clone 66538
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006176_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_006176_01
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_01
TS23: retina Moderate Regionally restricted euxassay_006176_01
Specimen euxassay_006176_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_006176_02
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_02
TS23: telencephalon Moderate Regionally restricted euxassay_006176_02
TS23: retina Moderate Regionally restricted euxassay_006176_02
Specimen euxassay_006176_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_006176_03
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_03
TS23: telencephalon Moderate Regionally restricted euxassay_006176_03
TS23: retina Moderate Regionally restricted euxassay_006176_03
Specimen euxassay_006176_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_04
TS23: facial ganglion Strong Regionally restricted euxassay_006176_04
TS23: stomach Moderate Regionally restricted euxassay_006176_04
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_04
TS23: telencephalon Moderate Regionally restricted euxassay_006176_04
TS23: retina Moderate Regionally restricted euxassay_006176_04
Specimen euxassay_006176_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_05
TS23: facial ganglion Strong Regionally restricted euxassay_006176_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006176_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_05
TS23: stomach Moderate Regionally restricted euxassay_006176_05
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_05
TS23: telencephalon Moderate Regionally restricted euxassay_006176_05
Specimen euxassay_006176_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_06
TS23: facial ganglion Strong Regionally restricted euxassay_006176_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006176_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_06
TS23: stomach Moderate Regionally restricted euxassay_006176_06
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_06
TS23: telencephalon Moderate Regionally restricted euxassay_006176_06
TS23: midbrain Moderate Regionally restricted euxassay_006176_06
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_06
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_06
Specimen euxassay_006176_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_07
TS23: facial ganglion Strong Regionally restricted euxassay_006176_07
TS23: vagus ganglion Strong Regionally restricted euxassay_006176_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006176_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_006176_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_07
TS23: stomach Moderate Regionally restricted euxassay_006176_07
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_07
TS23: midbrain Moderate Regionally restricted euxassay_006176_07
TS23: telencephalon Moderate Regionally restricted euxassay_006176_07
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006176_07
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_07
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_07
Specimen euxassay_006176_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_08
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006176_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_08
TS23: stomach Moderate Regionally restricted euxassay_006176_08
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_08
TS23: telencephalon Moderate Regionally restricted euxassay_006176_08
TS23: diencephalon Moderate Regionally restricted euxassay_006176_08
TS23: midbrain Moderate Regionally restricted euxassay_006176_08
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006176_08
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_08
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_08
TS23: pons mantle layer Strong Regionally restricted euxassay_006176_08 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_08 facial motor nucleus
Specimen euxassay_006176_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_006176_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_09
TS23: midgut Moderate Regionally restricted euxassay_006176_09
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_09
TS23: midbrain Moderate Regionally restricted euxassay_006176_09
TS23: telencephalon Moderate Regionally restricted euxassay_006176_09
TS23: diencephalon Moderate Regionally restricted euxassay_006176_09
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006176_09
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_09
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_09 facial motor nucleus
Specimen euxassay_006176_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_006176_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_10
TS23: midgut Moderate Regionally restricted euxassay_006176_10
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_10
TS23: diencephalon Moderate Regionally restricted euxassay_006176_10
TS23: telencephalon Moderate Regionally restricted euxassay_006176_10
TS23: midbrain Moderate Regionally restricted euxassay_006176_10
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_10
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_10
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_10 facial motor nucleus
Specimen euxassay_006176_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_11
TS23: midgut Moderate Regionally restricted euxassay_006176_11
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_11
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006176_11
TS23: hypothalamus Strong Regionally restricted euxassay_006176_11
TS23: midbrain Moderate Regionally restricted euxassay_006176_11
TS23: telencephalon Moderate Regionally restricted euxassay_006176_11
TS23: diencephalon Moderate Regionally restricted euxassay_006176_11
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_11
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_11
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_11 facial motor nucleus
Specimen euxassay_006176_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_006176_12
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_12
TS23: midbrain Moderate Regionally restricted euxassay_006176_12
TS23: diencephalon Moderate Regionally restricted euxassay_006176_12
TS23: telencephalon Moderate Regionally restricted euxassay_006176_12
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006176_12
TS23: hypothalamus Strong Regionally restricted euxassay_006176_12
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_12
TS23: midbrain lateral wall Moderate Regionally restricted euxassay_006176_12
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_12 facial motor nucleus
Specimen euxassay_006176_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_13
TS23: midgut Moderate Regionally restricted euxassay_006176_13
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_13
TS23: telencephalon Moderate Regionally restricted euxassay_006176_13
TS23: diencephalon Moderate Regionally restricted euxassay_006176_13
TS23: midbrain Moderate Regionally restricted euxassay_006176_13
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_13
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_13
TS23: spinal cord lateral wall Moderate Regionally restricted euxassay_006176_13
Specimen euxassay_006176_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_14
TS23: midgut Moderate Regionally restricted euxassay_006176_14
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_14
TS23: midbrain Moderate Regionally restricted euxassay_006176_14
TS23: telencephalon Moderate Regionally restricted euxassay_006176_14
TS23: diencephalon Moderate Regionally restricted euxassay_006176_14
TS23: hypothalamus Strong Regionally restricted euxassay_006176_14
TS23: midbrain tegmentum Strong Regionally restricted euxassay_006176_14
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_14
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_14 facial motor nucleus
Specimen euxassay_006176_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_006176_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006176_15
TS23: midgut Moderate Regionally restricted euxassay_006176_15
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_15
TS23: diencephalon Moderate Regionally restricted euxassay_006176_15
TS23: telencephalon Moderate Regionally restricted euxassay_006176_15
TS23: midbrain Moderate Regionally restricted euxassay_006176_15
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_15
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006176_15 facial motor nucleus
Specimen euxassay_006176_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006176_16
TS23: vagus ganglion Strong Regionally restricted euxassay_006176_16
TS23: trigeminal nerve Strong Regionally restricted euxassay_006176_16
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006176_16
TS23: midgut Moderate Regionally restricted euxassay_006176_16
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_16
TS23: diencephalon Moderate Regionally restricted euxassay_006176_16
TS23: telencephalon Moderate Regionally restricted euxassay_006176_16
TS23: midbrain Moderate Regionally restricted euxassay_006176_16
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_16
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_16
Specimen euxassay_006176_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006176_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_006176_17
TS23: midgut Moderate Regionally restricted euxassay_006176_17
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_17
TS23: diencephalon Moderate Regionally restricted euxassay_006176_17
TS23: telencephalon Moderate Regionally restricted euxassay_006176_17
TS23: midbrain Moderate Regionally restricted euxassay_006176_17
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_17
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_17
TS23: pons mantle layer Strong Regionally restricted euxassay_006176_17 trigeminal motor nucleus
Specimen euxassay_006176_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_18
TS23: facial ganglion Strong Regionally restricted euxassay_006176_18
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_18
TS23: diencephalon Moderate Regionally restricted euxassay_006176_18
TS23: telencephalon Moderate Regionally restricted euxassay_006176_18
TS23: midbrain Moderate Regionally restricted euxassay_006176_18
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_18
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_18
Specimen euxassay_006176_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_19
TS23: facial ganglion Strong Regionally restricted euxassay_006176_19
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_19
TS23: telencephalon Moderate Regionally restricted euxassay_006176_19
TS23: diencephalon Moderate Regionally restricted euxassay_006176_19
TS23: midbrain Moderate Regionally restricted euxassay_006176_19
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006176_19
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_19
Specimen euxassay_006176_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_20
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_20
TS23: telencephalon Moderate Regionally restricted euxassay_006176_20
TS23: midbrain Moderate Regionally restricted euxassay_006176_20
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_20
Specimen euxassay_006176_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_21
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_21
TS23: telencephalon Moderate Regionally restricted euxassay_006176_21
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006176_21
Specimen euxassay_006176_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006176_22
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_22
TS23: telencephalon Moderate Regionally restricted euxassay_006176_22
TS23: retina Moderate Regionally restricted euxassay_006176_22
Specimen euxassay_006176_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Weak Regionally restricted euxassay_006176_23
TS23: telencephalon Moderate Regionally restricted euxassay_006176_23
TS23: retina Moderate Regionally restricted euxassay_006176_23
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory