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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828915
Gene symbol: Trim36
Gene name: tripartite motif-containing 36
Probe: T30686
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012029_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_012029_01
Specimen euxassay_012029_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_02
TS23: neural retina Moderate Regionally restricted euxassay_012029_02
Specimen euxassay_012029_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_03
TS23: neural retina Moderate Regionally restricted euxassay_012029_03
Specimen euxassay_012029_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_04
TS23: facial ganglion Strong Regionally restricted euxassay_012029_04
Specimen euxassay_012029_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_05
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_05
Specimen euxassay_012029_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012029_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_06
Specimen euxassay_012029_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012029_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_012029_07 trigeminal motor nucleus
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_07
Specimen euxassay_012029_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_08
TS23: ventral grey horn Weak Regionally restricted euxassay_012029_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012029_08 facial motor nucleus
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_08
Specimen euxassay_012029_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Weak Regionally restricted euxassay_012029_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_012029_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012029_09 facial motor nucleus
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_09
Specimen euxassay_012029_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_10
TS23: ventral grey horn Weak Regionally restricted euxassay_012029_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_10
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_012029_10
Specimen euxassay_012029_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012029_11 facial motor nucleus
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_11
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_012029_11
Specimen euxassay_012029_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_12
TS23: vomeronasal organ Weak Regionally restricted euxassay_012029_12
TS23: ventral grey horn Weak Regionally restricted euxassay_012029_12
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012029_12
Specimen euxassay_012029_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_13
TS23: ventral grey horn Weak Regionally restricted euxassay_012029_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012029_13
Specimen euxassay_012029_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_012029_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012029_14
Specimen euxassay_012029_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_15
TS23: vomeronasal organ Weak Regionally restricted euxassay_012029_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012029_15 facial motor nucleus
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012029_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012029_15
Specimen euxassay_012029_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Weak Regionally restricted euxassay_012029_16
TS23: vagus ganglion Weak Regionally restricted euxassay_012029_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012029_16 facial motor nucleus
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012029_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012029_16
Specimen euxassay_012029_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012029_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_012029_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_012029_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_012029_17 trigeminal motor nucleus
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012029_17
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_012029_17
Specimen euxassay_012029_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012029_18
Specimen euxassay_012029_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_19
Specimen euxassay_012029_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_20
TS23: facial ganglion Strong Regionally restricted euxassay_012029_20
Specimen euxassay_012029_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_012029_21
Specimen euxassay_012029_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_012029_22
Specimen euxassay_012029_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_012029_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory