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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828723
Gene symbol: Timp3
Gene name: tissue inhibitor of metalloproteinase 3
Probe: IMAGE clone 2065144
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S9 - Timp3: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: liver Present Single cells Expression is present in single cells in which the intercellular distance between stained cells is much larger than the cell diameter of an individual cell and in circles of cells. A thumbnail photo of the staining is contained in the table.
Specimen euxassay_000783_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_01
TS23: limb Moderate Regionally restricted euxassay_000783_01
TS23: limb musculature Present euxassay_000783_01
TS23: diaphragm Weak Regionally restricted euxassay_000783_01
Specimen euxassay_000783_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_02
TS23: limb Moderate Regionally restricted euxassay_000783_02
TS23: limb musculature Present euxassay_000783_02
TS23: diaphragm Weak Regionally restricted euxassay_000783_02
Specimen euxassay_000783_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_03
TS23: limb Moderate Regionally restricted euxassay_000783_03
TS23: limb musculature Present euxassay_000783_03
TS23: diaphragm Weak Regionally restricted euxassay_000783_03
Specimen euxassay_000783_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_04
TS23: limb Moderate Regionally restricted euxassay_000783_04
TS23: limb musculature Present euxassay_000783_04
TS23: vibrissa Weak Regionally restricted euxassay_000783_04
TS23: diaphragm Weak Regionally restricted euxassay_000783_04
Specimen euxassay_000783_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_05
TS23: limb Moderate Regionally restricted euxassay_000783_05
TS23: limb musculature Present euxassay_000783_05
TS23: vibrissa Weak Regionally restricted euxassay_000783_05
TS23: diaphragm Weak Regionally restricted euxassay_000783_05
TS23: nasal capsule Weak Regionally restricted euxassay_000783_05
Specimen euxassay_000783_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_06
TS23: vibrissa Weak Regionally restricted euxassay_000783_06
TS23: diaphragm Weak Regionally restricted euxassay_000783_06
TS23: nasal capsule Weak Regionally restricted euxassay_000783_06
TS23: lower jaw incisor Weak Regionally restricted euxassay_000783_06
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_06
Specimen euxassay_000783_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_07
TS23: vibrissa Weak Regionally restricted euxassay_000783_07
TS23: diaphragm Weak Regionally restricted euxassay_000783_07
TS23: nasal capsule Weak Regionally restricted euxassay_000783_07
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_07
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_000783_07
Specimen euxassay_000783_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_08
TS23: diaphragm Weak Regionally restricted euxassay_000783_08
TS23: nasal capsule Weak Regionally restricted euxassay_000783_08
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_08
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_000783_08
Specimen euxassay_000783_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_09
TS23: diaphragm Weak Regionally restricted euxassay_000783_09
TS23: nasal capsule Weak Regionally restricted euxassay_000783_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_000783_09
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_09
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_000783_09
TS23: ventral grey horn Weak Regionally restricted euxassay_000783_09
Specimen euxassay_000783_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_10
TS23: diaphragm Weak Regionally restricted euxassay_000783_10
TS23: nasal capsule Weak Regionally restricted euxassay_000783_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000783_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000783_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000783_10
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000783_10
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_000783_10
TS23: ventral grey horn Weak Regionally restricted euxassay_000783_10
Specimen euxassay_000783_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_11
TS23: nasal capsule Weak Regionally restricted euxassay_000783_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000783_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000783_11
TS23: lower jaw molar Moderate Regionally restricted euxassay_000783_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000783_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000783_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000783_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000783_11
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_000783_11
TS23: ventral grey horn Weak Regionally restricted euxassay_000783_11
Specimen euxassay_000783_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_12
TS23: nasal capsule Weak Regionally restricted euxassay_000783_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000783_12
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000783_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000783_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000783_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000783_12
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_000783_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000783_12
TS23: ventral grey horn Weak Regionally restricted euxassay_000783_12
Specimen euxassay_000783_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_13
TS23: nasal capsule Weak Regionally restricted euxassay_000783_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000783_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000783_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000783_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_000783_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000783_13
TS23: ventral grey horn Weak Regionally restricted euxassay_000783_13
Specimen euxassay_000783_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_14
TS23: nasal capsule Weak Regionally restricted euxassay_000783_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000783_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000783_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000783_14
TS23: ventral grey horn Weak Regionally restricted euxassay_000783_14
Specimen euxassay_000783_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_15
TS23: nasal capsule Weak Regionally restricted euxassay_000783_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_000783_15
Specimen euxassay_000783_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_16
TS23: diaphragm Weak Regionally restricted euxassay_000783_16
TS23: nasal capsule Weak Regionally restricted euxassay_000783_16
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_16
Specimen euxassay_000783_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_17
TS23: diaphragm Weak Regionally restricted euxassay_000783_17
TS23: nasal capsule Weak Regionally restricted euxassay_000783_17
TS23: pons ventricular layer Weak Regionally restricted euxassay_000783_17
Specimen euxassay_000783_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_18
TS23: limb Moderate Regionally restricted euxassay_000783_18
TS23: limb musculature Present euxassay_000783_18
TS23: diaphragm Weak Regionally restricted euxassay_000783_18
TS23: nasal capsule Weak Regionally restricted euxassay_000783_18
Specimen euxassay_000783_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000783_19
TS23: limb Moderate Regionally restricted euxassay_000783_19
TS23: limb musculature Present euxassay_000783_19
TS23: diaphragm Weak Regionally restricted euxassay_000783_19
TS23: nasal capsule Weak Regionally restricted euxassay_000783_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory