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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828636
Gene symbol: Tcf25
Gene name: transcription factor 25 (basic helix-loop-helix)
Probe: T30311
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011485_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_01
TS23: neural retina Strong Regionally restricted euxassay_011485_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011485_01
Specimen euxassay_011485_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_02
TS23: facial ganglion Strong Regionally restricted euxassay_011485_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011485_02
TS23: mandible Weak Regionally restricted euxassay_011485_02
Specimen euxassay_011485_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_03
TS23: facial ganglion Strong Regionally restricted euxassay_011485_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011485_03
TS23: mandible Weak Regionally restricted euxassay_011485_03
Specimen euxassay_011485_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_04
TS23: facial ganglion Strong Regionally restricted euxassay_011485_04
Specimen euxassay_011485_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011485_05
TS23: vibrissa Moderate Regionally restricted euxassay_011485_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_011485_05 trigeminal motor nucleus
TS23: maxilla Weak Regionally restricted euxassay_011485_05
TS23: mandible Weak Regionally restricted euxassay_011485_05
Specimen euxassay_011485_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011485_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011485_06
TS23: vibrissa Moderate Regionally restricted euxassay_011485_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011485_06 facial motor nucleus
TS23: mandible Weak Regionally restricted euxassay_011485_06
Specimen euxassay_011485_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011485_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011485_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_07
TS23: vibrissa Moderate Regionally restricted euxassay_011485_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011485_07 facial motor nucleus
TS23: maxilla Weak Regionally restricted euxassay_011485_07
TS23: mandible Weak Regionally restricted euxassay_011485_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011485_07
Specimen euxassay_011485_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_08
TS23: trigeminal nerve Strong Regionally restricted euxassay_011485_08
TS23: vagus ganglion Strong Regionally restricted euxassay_011485_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_08
TS23: vibrissa Moderate Regionally restricted euxassay_011485_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011485_08 facial motor nucleus
TS23: maxilla Weak Regionally restricted euxassay_011485_08
TS23: mandible Weak Regionally restricted euxassay_011485_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011485_08
Specimen euxassay_011485_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011485_09
TS23: vagus ganglion Strong Regionally restricted euxassay_011485_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011485_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_011485_09
TS23: clavicle Moderate Regionally restricted euxassay_011485_09
Specimen euxassay_011485_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011485_10
TS23: clavicle Moderate Regionally restricted euxassay_011485_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_011485_10
Specimen euxassay_011485_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_11
TS23: mandible Weak Regionally restricted euxassay_011485_11
TS23: maxilla Weak Regionally restricted euxassay_011485_11
TS23: thyroid gland Moderate Regionally restricted euxassay_011485_11
TS23: thymus primordium Moderate Regionally restricted euxassay_011485_11
Specimen euxassay_011485_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_12
TS23: mandible Weak Regionally restricted euxassay_011485_12
TS23: thymus primordium Weak Regionally restricted euxassay_011485_12
TS23: ventral grey horn Strong Regionally restricted euxassay_011485_12
Specimen euxassay_011485_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_13
TS23: thymus primordium Weak Regionally restricted euxassay_011485_13
Specimen euxassay_011485_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011485_14 facial motor nucleus
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011485_14
TS23: thymus primordium Weak Regionally restricted euxassay_011485_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_011485_14
Specimen euxassay_011485_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011485_15 facial motor nucleus
TS23: upper jaw incisor Weak Regionally restricted euxassay_011485_15
TS23: lower jaw incisor Weak Regionally restricted euxassay_011485_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011485_15
TS23: thyroid gland Weak Regionally restricted euxassay_011485_15
TS23: thymus primordium Weak Regionally restricted euxassay_011485_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_011485_15
Specimen euxassay_011485_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011485_16
TS23: trigeminal nerve Strong Regionally restricted euxassay_011485_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_011485_16 trigeminal motor nucleus
TS23: upper jaw incisor Weak Regionally restricted euxassay_011485_16
TS23: lower jaw incisor Weak Regionally restricted euxassay_011485_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011485_16
TS23: cervical ganglion Moderate Regionally restricted euxassay_011485_16
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011485_16
TS23: ventral grey horn Strong Regionally restricted euxassay_011485_16
Specimen euxassay_011485_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_011485_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011485_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011485_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_17
TS23: mandible Weak Regionally restricted euxassay_011485_17
TS23: maxilla Weak Regionally restricted euxassay_011485_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011485_17
TS23: clavicle Moderate Regionally restricted euxassay_011485_17
TS23: ventral grey horn Strong Regionally restricted euxassay_011485_17
Specimen euxassay_011485_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011485_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011485_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_18
TS23: upper jaw molar Weak Regionally restricted euxassay_011485_18
TS23: maxilla Weak Regionally restricted euxassay_011485_18
TS23: mandible Weak Regionally restricted euxassay_011485_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011485_18
TS23: clavicle Moderate Regionally restricted euxassay_011485_18
Specimen euxassay_011485_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Regionally restricted euxassay_011485_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011485_19
TS23: vibrissa Moderate Regionally restricted euxassay_011485_19
TS23: maxilla Weak Regionally restricted euxassay_011485_19
TS23: mandible Weak Regionally restricted euxassay_011485_19
TS23: lower jaw molar Weak Regionally restricted euxassay_011485_19
TS23: upper jaw molar Weak Regionally restricted euxassay_011485_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011485_19
Specimen euxassay_011485_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_20
TS23: facial ganglion Strong Regionally restricted euxassay_011485_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011485_20
TS23: vibrissa Moderate Regionally restricted euxassay_011485_20
TS23: maxilla Weak Regionally restricted euxassay_011485_20
TS23: mandible Weak Regionally restricted euxassay_011485_20
Specimen euxassay_011485_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011485_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011485_21
TS23: vibrissa Moderate Regionally restricted euxassay_011485_21
TS23: mandible Weak Regionally restricted euxassay_011485_21
TS23: maxilla Weak Regionally restricted euxassay_011485_21
Specimen euxassay_011485_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011485_22
TS23: orbito-sphenoid Weak Regionally restricted euxassay_011485_22
TS23: vault of skull Weak Regionally restricted euxassay_011485_22
TS23: vibrissa Moderate Regionally restricted euxassay_011485_22
Specimen euxassay_011485_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011485_23
TS23: vault of skull Moderate Regionally restricted euxassay_011485_23
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_011485_23
Specimen euxassay_011485_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011485_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory