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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828372
Gene symbol: Socs4
Gene name: suppressor of cytokine signaling 4
Probe: T37069
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012190_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Moderate Regionally restricted euxassay_012190_01
Specimen euxassay_012190_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_02
TS23: retina Moderate Regionally restricted euxassay_012190_02
Specimen euxassay_012190_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_03
TS23: retina Moderate Regionally restricted euxassay_012190_03
Specimen euxassay_012190_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_04
Specimen euxassay_012190_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_05
Specimen euxassay_012190_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_06
TS23: pons ventricular layer Weak Regionally restricted euxassay_012190_06
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_012190_06
Specimen euxassay_012190_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_07
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012190_07
Specimen euxassay_012190_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_08
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_08
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_012190_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012190_08
Specimen euxassay_012190_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_09
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_012190_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_012190_09
Specimen euxassay_012190_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012190_10
TS23: thymus primordium Weak Regionally restricted euxassay_012190_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012190_10
Specimen euxassay_012190_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012190_11
TS23: thymus primordium Moderate Regionally restricted euxassay_012190_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012190_11
Specimen euxassay_012190_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012190_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_12
TS23: thymus primordium Moderate Regionally restricted euxassay_012190_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012190_12
Specimen euxassay_012190_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_13
TS23: thymus primordium Moderate Regionally restricted euxassay_012190_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012190_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012190_13
Specimen euxassay_012190_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_14
TS23: thymus primordium Moderate Regionally restricted euxassay_012190_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012190_14
Specimen euxassay_012190_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012190_15
Specimen euxassay_012190_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_16
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_16
Specimen euxassay_012190_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012190_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_17
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012190_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012190_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_17
Specimen euxassay_012190_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_18
Specimen euxassay_012190_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_19
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_19
Specimen euxassay_012190_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_20
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012190_20
Specimen euxassay_012190_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_21
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012190_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012190_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012190_21
Specimen euxassay_012190_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_22
TS23: retina Weak Regionally restricted euxassay_012190_22
Specimen euxassay_012190_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012190_23
TS23: retina Weak Regionally restricted euxassay_012190_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory