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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828255
Gene symbol: Slc5a6
Gene name: solute carrier family 5 (sodium-dependent vitamin transporter), member 6
Probe: T56011
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019690_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_04
Specimen euxassay_019690_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_05
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_05
Specimen euxassay_019690_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_06
TS23: axial musculature Weak Regionally restricted euxassay_019690_06
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_06
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_06
Specimen euxassay_019690_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_07
TS23: axial musculature Weak Regionally restricted euxassay_019690_07
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_07
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_07
Specimen euxassay_019690_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_08
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_08
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_08
Specimen euxassay_019690_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_09
TS23: pericardium Weak Spotted euxassay_019690_09
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_09
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_09
Specimen euxassay_019690_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_10
TS23: pericardium Weak Spotted euxassay_019690_10
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_10
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_10
Specimen euxassay_019690_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_11
TS23: pericardium Moderate Spotted euxassay_019690_11
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_11
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_11
Specimen euxassay_019690_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_12
TS23: pericardium Moderate Spotted euxassay_019690_12
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_12
TS23: pituitary gland Moderate Spotted euxassay_019690_12
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_12
Specimen euxassay_019690_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pericardium Moderate Spotted euxassay_019690_13
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_13
TS23: pituitary gland Moderate Spotted euxassay_019690_13
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_13
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_13
Specimen euxassay_019690_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pericardium Moderate Spotted euxassay_019690_14
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_14
Specimen euxassay_019690_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_15
TS23: pericardium Moderate Spotted euxassay_019690_15
TS23: urethra Moderate Regionally restricted euxassay_019690_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: pituitary gland Moderate Spotted euxassay_019690_15
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_15
Specimen euxassay_019690_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_16
TS23: pericardium Moderate Spotted euxassay_019690_16
TS23: urethra Moderate Regionally restricted euxassay_019690_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_16
TS23: pituitary gland Moderate Spotted euxassay_019690_16
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_16
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_16
Specimen euxassay_019690_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pericardium Moderate Spotted euxassay_019690_17
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_17
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_17
Specimen euxassay_019690_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_18
TS23: pericardium Moderate Spotted euxassay_019690_18
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_18
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_18
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_18
Specimen euxassay_019690_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_19
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_19
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_19
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_19
Specimen euxassay_019690_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_20
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_019690_20
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_20
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_019690_20
Specimen euxassay_019690_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_21
TS23: axial musculature Weak Regionally restricted euxassay_019690_21
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_019690_21
Specimen euxassay_019690_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019690_22
TS23: axial musculature Weak Regionally restricted euxassay_019690_22
Specimen euxassay_019690_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_019690_23
TS23: axial musculature Weak Regionally restricted euxassay_019690_23
Specimen euxassay_019690_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_019690_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory