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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828193
Gene symbol: Slc31a1
Gene name: solute carrier family 31, member 1
Probe: MGC clone 28108
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex Weak
TS23: blood vessel Moderate Regionally restricted Expression is present in the vasculature of the brain.
TS23: choroid plexus Strong
Specimen euxassay_004933_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_03
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_03
Specimen euxassay_004933_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_04
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_04
Specimen euxassay_004933_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_05
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_05
Specimen euxassay_004933_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_06
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_06
TS23: choroid invagination Strong Regionally restricted euxassay_004933_06
Specimen euxassay_004933_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_004933_07
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_07
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_07
TS23: adrenal medulla Strong Regionally restricted euxassay_004933_07
Specimen euxassay_004933_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_08
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_08
TS23: choroid invagination Strong Regionally restricted euxassay_004933_08
TS23: cervical ganglion Strong Regionally restricted euxassay_004933_08
TS23: adrenal medulla Strong Regionally restricted euxassay_004933_08
Specimen euxassay_004933_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_004933_09
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_09
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_09
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_004933_09
TS23: cervical ganglion Strong Regionally restricted euxassay_004933_09
TS23: adrenal medulla Strong Regionally restricted euxassay_004933_09
Specimen euxassay_004933_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_004933_10
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_10
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_10
TS23: thoracic ganglion Strong Regionally restricted euxassay_004933_10
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_004933_10
TS23: upper jaw incisor Strong Regionally restricted euxassay_004933_10
Specimen euxassay_004933_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_004933_11
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_11
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_11
TS23: thoracic ganglion Strong Regionally restricted euxassay_004933_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_004933_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_004933_11
Specimen euxassay_004933_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_12
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_12
TS23: diencephalon roof plate Strong Regionally restricted euxassay_004933_12
TS23: thoracic ganglion Strong Regionally restricted euxassay_004933_12
Specimen euxassay_004933_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon roof plate Strong Regionally restricted euxassay_004933_13
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_13
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_13
TS23: thoracic ganglion Strong Regionally restricted euxassay_004933_13
Specimen euxassay_004933_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_14
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_14
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_004933_14
TS23: thoracic ganglion Strong Regionally restricted euxassay_004933_14
Specimen euxassay_004933_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_15
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_15
TS23: choroid invagination Strong Regionally restricted euxassay_004933_15
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_004933_15
TS23: adrenal medulla Strong Regionally restricted euxassay_004933_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_004933_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_004933_15
Specimen euxassay_004933_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_16
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_16
TS23: choroid invagination Strong Regionally restricted euxassay_004933_16
TS23: cervical ganglion Strong Regionally restricted euxassay_004933_16
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_004933_16
TS23: adrenal medulla Strong Regionally restricted euxassay_004933_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_004933_16
Specimen euxassay_004933_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_17
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_17
TS23: choroid invagination Strong Regionally restricted euxassay_004933_17
TS23: cervical ganglion Strong Regionally restricted euxassay_004933_17
Specimen euxassay_004933_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_18
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_18
TS23: choroid invagination Strong Regionally restricted euxassay_004933_18
Specimen euxassay_004933_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_19
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_19
TS23: choroid invagination Strong Regionally restricted euxassay_004933_19
Specimen euxassay_004933_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_20
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_20
Specimen euxassay_004933_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_21
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_21
Specimen euxassay_004933_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_22
TS23: medulla oblongata part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_004933_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory