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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828095
Gene symbol: Slc12a5
Gene name: solute carrier family 12, member 5
Probe: T56012
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019691_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_01
Specimen euxassay_019691_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_02
Specimen euxassay_019691_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_03
Specimen euxassay_019691_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_04
Specimen euxassay_019691_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_05
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019691_05
Specimen euxassay_019691_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_019691_06
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019691_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_06
Specimen euxassay_019691_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_07
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019691_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_07
Specimen euxassay_019691_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_08
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_019691_08
Specimen euxassay_019691_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_09
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019691_09
Specimen euxassay_019691_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_10
TS23: ventral grey horn Weak Regionally restricted euxassay_019691_10
Specimen euxassay_019691_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_11
Specimen euxassay_019691_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_12
Specimen euxassay_019691_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_13
Specimen euxassay_019691_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_019691_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_14
Specimen euxassay_019691_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_15
Specimen euxassay_019691_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_16
Specimen euxassay_019691_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_019691_17
Specimen euxassay_019691_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019691_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_18
Specimen euxassay_019691_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019691_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_019691_19
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_019691_19
Specimen euxassay_019691_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_019691_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_019691_20
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019691_20
Specimen euxassay_019691_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_21
Specimen euxassay_019691_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_22
Specimen euxassay_019691_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_23
Specimen euxassay_019691_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019691_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory