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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828080
Gene symbol: Six2
Gene name: sine oculis-related homeobox 2
Probe: T55174
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019523_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019523_01
Specimen euxassay_019523_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019523_02
Specimen euxassay_019523_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019523_03
Specimen euxassay_019523_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_04
Specimen euxassay_019523_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_05
TS23: facial ganglion Moderate Regionally restricted euxassay_019523_05
Specimen euxassay_019523_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_019523_06
TS23: facial ganglion Moderate Regionally restricted euxassay_019523_06
Specimen euxassay_019523_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_019523_07
TS23: facial ganglion Moderate Regionally restricted euxassay_019523_07
Specimen euxassay_019523_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_019523_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_019523_08
Specimen euxassay_019523_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_019523_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_09
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019523_09
Specimen euxassay_019523_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_10
TS23: vagus ganglion Strong Regionally restricted euxassay_019523_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019523_10
Specimen euxassay_019523_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_11
Specimen euxassay_019523_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_12
Specimen euxassay_019523_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019523_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_13
Specimen euxassay_019523_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_14
Specimen euxassay_019523_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_019523_18
Specimen euxassay_019523_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_19
Specimen euxassay_019523_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_019523_20
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_019523_20
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_019523_20
Specimen euxassay_019523_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_21
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019523_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019523_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019523_21
Specimen euxassay_019523_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_22
TS23: facial ganglion Strong Regionally restricted euxassay_019523_22
Specimen euxassay_019523_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019523_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_23
TS23: facial ganglion Strong Regionally restricted euxassay_019523_23
Specimen euxassay_019523_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_019523_24
TS23: neural retina Moderate Regionally restricted euxassay_019523_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory