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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828057
Gene symbol: Shisa3
Gene name: shisa family member 3
Probe: T39775
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_016050_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_016050_03
Specimen euxassay_016050_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_016050_04
Specimen euxassay_016050_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_016050_05
Specimen euxassay_016050_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Weak Regionally restricted euxassay_016050_06
Specimen euxassay_016050_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_016050_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_07
Specimen euxassay_016050_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_016050_08
TS23: metanephros Strong Regionally restricted euxassay_016050_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_08
Specimen euxassay_016050_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_016050_09
TS23: metanephros Strong Regionally restricted euxassay_016050_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_09
TS23: orbito-sphenoid Weak Regionally restricted euxassay_016050_09
Specimen euxassay_016050_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_016050_10
TS23: metanephros Strong Regionally restricted euxassay_016050_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_10
TS23: tail mesenchyme Weak Regionally restricted euxassay_016050_10
TS23: orbito-sphenoid Weak Regionally restricted euxassay_016050_10
TS23: basisphenoid bone Weak Regionally restricted euxassay_016050_10
Specimen euxassay_016050_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_016050_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_11
TS23: axial skeleton Moderate Regionally restricted euxassay_016050_11
TS23: tail mesenchyme Weak Regionally restricted euxassay_016050_11
TS23: basisphenoid bone Weak Regionally restricted euxassay_016050_11
TS23: orbito-sphenoid Weak Regionally restricted euxassay_016050_11
Specimen euxassay_016050_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_016050_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016050_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016050_12
TS23: axial skeleton Moderate Regionally restricted euxassay_016050_12
Specimen euxassay_016050_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_016050_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_016050_13
TS23: tail mesenchyme Weak Regionally restricted euxassay_016050_13
Specimen euxassay_016050_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016050_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016050_14
TS23: axial skeleton Weak Regionally restricted euxassay_016050_14
TS23: tail mesenchyme Weak Regionally restricted euxassay_016050_14
TS23: orbito-sphenoid Weak Regionally restricted euxassay_016050_14
TS23: basisphenoid bone Weak Regionally restricted euxassay_016050_14
Specimen euxassay_016050_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_15
TS23: axial skeleton Weak Regionally restricted euxassay_016050_15
TS23: orbito-sphenoid Weak Regionally restricted euxassay_016050_15
TS23: basisphenoid bone Weak Regionally restricted euxassay_016050_15
Specimen euxassay_016050_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_016050_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_16
TS23: axial skeleton Weak Regionally restricted euxassay_016050_16
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_016050_16
TS23: basisphenoid bone Moderate Regionally restricted euxassay_016050_16
Specimen euxassay_016050_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Weak Regionally restricted euxassay_016050_17
TS23: metanephros Strong Regionally restricted euxassay_016050_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_17
TS23: orbito-sphenoid Weak Regionally restricted euxassay_016050_17
TS23: basisphenoid bone Weak Regionally restricted euxassay_016050_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_016050_17
Specimen euxassay_016050_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_016050_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016050_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_016050_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_016050_18
Specimen euxassay_016050_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_016050_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_016050_19
Specimen euxassay_016050_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_016050_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_016050_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_016050_20
Specimen euxassay_016050_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_016050_21
Specimen euxassay_016050_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_016050_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory