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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828053
Gene symbol: Shf
Gene name: Src homology 2 domain containing F
Probe: MGC clone 30399
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003020_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_03
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_003020_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_03
Specimen euxassay_003020_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_04
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_04
Specimen euxassay_003020_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_05
TS23: facial ganglion Moderate Regionally restricted euxassay_003020_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_05
Specimen euxassay_003020_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_06
TS23: facial ganglion Moderate Regionally restricted euxassay_003020_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003020_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_06
Specimen euxassay_003020_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003020_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003020_07
TS23: facial ganglion Moderate Regionally restricted euxassay_003020_07
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_07
TS23: metencephalon basal plate Weak Regionally restricted euxassay_003020_07 trigeminal motor nucleus
Specimen euxassay_003020_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003020_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003020_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003020_08
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_08
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003020_08 facial motor nucleus
Specimen euxassay_003020_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003020_09
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_003020_09
Specimen euxassay_003020_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003020_10
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003020_10
Specimen euxassay_003020_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003020_11
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_11
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_003020_11
Specimen euxassay_003020_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003020_12
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003020_12
Specimen euxassay_003020_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003020_13
Specimen euxassay_003020_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_003020_14
Specimen euxassay_003020_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_15
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003020_15 facial motor nucleus
Specimen euxassay_003020_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003020_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_16
TS23: metencephalon basal plate Weak Regionally restricted euxassay_003020_16 trigeminal motor nucleus
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_003020_16 facial motor nucleus
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_003020_16
TS23: cervical ganglion Strong Regionally restricted euxassay_003020_16
Specimen euxassay_003020_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003020_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003020_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003020_17
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_17
Specimen euxassay_003020_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003020_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003020_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003020_18
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_18
Specimen euxassay_003020_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_19
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_19
Specimen euxassay_003020_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_20
TS23: facial ganglion Moderate Regionally restricted euxassay_003020_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_20
Specimen euxassay_003020_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_21
TS23: facial ganglion Moderate Regionally restricted euxassay_003020_21
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_003020_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003020_21
Specimen euxassay_003020_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003020_22
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_003020_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory