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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827992
Gene symbol: Serpinb5
Gene name: serine (or cysteine) peptidase inhibitor, clade B, member 5
Probe: MGC clone 5950
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006553_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_01
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_01
TS23: vertebral axis musculature Weak Spotted euxassay_006553_01
TS23: epidermis Moderate Regionally restricted euxassay_006553_01
Specimen euxassay_006553_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_02
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_02
TS23: vertebral axis musculature Weak Spotted euxassay_006553_02
TS23: epidermis Moderate Regionally restricted euxassay_006553_02
Specimen euxassay_006553_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_03
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_03
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_03
TS23: lung Moderate Spotted euxassay_006553_03
TS23: vertebral axis musculature Weak Spotted euxassay_006553_03
TS23: diaphragm Weak Spotted euxassay_006553_03
TS23: epidermis Moderate Regionally restricted euxassay_006553_03
Specimen euxassay_006553_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_04
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_04
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_04
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_04
TS23: lung Moderate Spotted euxassay_006553_04
TS23: vertebral axis musculature Weak Spotted euxassay_006553_04
TS23: diaphragm Weak Spotted euxassay_006553_04
TS23: epidermis Moderate Regionally restricted euxassay_006553_04
Specimen euxassay_006553_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_05
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_05
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_05
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_05
TS23: lung Moderate Spotted euxassay_006553_05
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_05
TS23: vertebral axis musculature Weak Spotted euxassay_006553_05
TS23: diaphragm Weak Spotted euxassay_006553_05
TS23: epidermis Moderate Regionally restricted euxassay_006553_05
TS23: inner ear Strong Regionally restricted euxassay_006553_05
Specimen euxassay_006553_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_06
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_06
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_06
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_06
TS23: lung Moderate Spotted euxassay_006553_06
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_06
TS23: diaphragm Weak Spotted euxassay_006553_06
TS23: vertebral axis musculature Weak Spotted euxassay_006553_06
TS23: epidermis Moderate Regionally restricted euxassay_006553_06
TS23: inner ear Strong Regionally restricted euxassay_006553_06
Specimen euxassay_006553_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_07
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_07
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_07
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_07
TS23: lung Moderate Spotted euxassay_006553_07
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_07
TS23: upper jaw molar Strong Regionally restricted euxassay_006553_07
TS23: lower jaw molar Strong Regionally restricted euxassay_006553_07
TS23: vertebral axis musculature Weak Spotted euxassay_006553_07
TS23: diaphragm Weak Spotted euxassay_006553_07
TS23: epidermis Moderate Regionally restricted euxassay_006553_07
TS23: heart ventricle Weak Spotted euxassay_006553_07
TS23: inner ear Strong Regionally restricted euxassay_006553_07
Specimen euxassay_006553_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_08
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_08
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_08
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_08
TS23: lung Strong Spotted euxassay_006553_08
TS23: lower jaw molar Strong Regionally restricted euxassay_006553_08
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_08
TS23: diaphragm Weak Spotted euxassay_006553_08
TS23: vertebral axis musculature Weak Spotted euxassay_006553_08
TS23: epidermis Moderate Regionally restricted euxassay_006553_08
TS23: heart ventricle Weak Spotted euxassay_006553_08
TS23: inner ear Strong Regionally restricted euxassay_006553_08
Specimen euxassay_006553_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_09
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_09
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_09
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_09
TS23: lung Strong Spotted euxassay_006553_09
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_09
TS23: lower jaw molar Strong Regionally restricted euxassay_006553_09
TS23: vertebral axis musculature Weak Spotted euxassay_006553_09
TS23: diaphragm Weak Spotted euxassay_006553_09
TS23: epidermis Moderate Regionally restricted euxassay_006553_09
TS23: heart ventricle Moderate Spotted euxassay_006553_09
Specimen euxassay_006553_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_10
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_10
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_10
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_10
TS23: lung Moderate Spotted euxassay_006553_10
TS23: lower jaw incisor Strong Regionally restricted euxassay_006553_10
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_10
TS23: pharynx epithelium Strong Regionally restricted euxassay_006553_10
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_10
TS23: diaphragm Weak Spotted euxassay_006553_10
TS23: vertebral axis musculature Weak Spotted euxassay_006553_10
TS23: epidermis Moderate Regionally restricted euxassay_006553_10
TS23: heart ventricle Moderate Spotted euxassay_006553_10
Specimen euxassay_006553_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_11
TS23: stomach proventricular region epithelium Strong Regionally restricted euxassay_006553_11
TS23: lung Moderate Spotted euxassay_006553_11
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006553_11
TS23: pharynx epithelium Strong Regionally restricted euxassay_006553_11
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_11
TS23: diaphragm Weak Spotted euxassay_006553_11
TS23: vertebral axis musculature Weak Spotted euxassay_006553_11
TS23: epidermis Moderate Regionally restricted euxassay_006553_11
TS23: heart ventricle Moderate Spotted euxassay_006553_11
Specimen euxassay_006553_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: external naris epithelium Strong Regionally restricted euxassay_006553_12
TS23: esophagus epithelium Strong Regionally restricted euxassay_006553_12
TS23: lung Moderate Spotted euxassay_006553_12
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_006553_12
TS23: pharynx epithelium Strong Regionally restricted euxassay_006553_12
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_12
TS23: diaphragm Weak Spotted euxassay_006553_12
TS23: vertebral axis musculature Weak Spotted euxassay_006553_12
TS23: epidermis Moderate Regionally restricted euxassay_006553_12
TS23: heart ventricle Moderate Spotted euxassay_006553_12
Specimen euxassay_006553_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: external naris epithelium Strong Regionally restricted euxassay_006553_13
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006553_13
TS23: esophagus epithelium Strong Regionally restricted euxassay_006553_13
TS23: lung Moderate Spotted euxassay_006553_13
TS23: trachea Moderate Spotted euxassay_006553_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_006553_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_006553_13
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_13
TS23: pharynx epithelium Strong Regionally restricted euxassay_006553_13
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_13
TS23: diaphragm Moderate Spotted euxassay_006553_13
TS23: vertebral axis musculature Weak Spotted euxassay_006553_13
TS23: epidermis Moderate Regionally restricted euxassay_006553_13
TS23: heart ventricle Moderate Spotted euxassay_006553_13
Specimen euxassay_006553_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006553_14
TS23: lung Moderate Spotted euxassay_006553_14
TS23: trachea Moderate Spotted euxassay_006553_14
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_14
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_14
TS23: pharynx epithelium Strong Regionally restricted euxassay_006553_14
TS23: diaphragm Moderate Spotted euxassay_006553_14
TS23: vertebral axis musculature Weak Spotted euxassay_006553_14
TS23: epidermis Moderate Regionally restricted euxassay_006553_14
TS23: heart ventricle Moderate Spotted euxassay_006553_14
TS23: bladder Moderate Regionally restricted euxassay_006553_14
TS23: urethra Moderate Regionally restricted euxassay_006553_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_006553_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Spotted euxassay_006553_15
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_15
TS23: pharynx epithelium Strong Regionally restricted euxassay_006553_15
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_15
TS23: vertebral axis musculature Weak Spotted euxassay_006553_15
TS23: diaphragm Moderate Spotted euxassay_006553_15
TS23: epidermis Moderate Regionally restricted euxassay_006553_15
TS23: heart ventricle Moderate Spotted euxassay_006553_15
TS23: bladder Moderate Regionally restricted euxassay_006553_15
TS23: urethra Moderate Regionally restricted euxassay_006553_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_006553_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006553_16
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_16
TS23: lung Strong Spotted euxassay_006553_16
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_006553_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_006553_16
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_16
TS23: vertebral axis musculature Weak Spotted euxassay_006553_16
TS23: epidermis Moderate Regionally restricted euxassay_006553_16
TS23: heart ventricle Weak Spotted euxassay_006553_16
Specimen euxassay_006553_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006553_17
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_17
TS23: lung Strong Spotted euxassay_006553_17
TS23: upper jaw molar Strong Regionally restricted euxassay_006553_17
TS23: lower jaw molar Strong Regionally restricted euxassay_006553_17
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_17
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_17
TS23: vertebral axis musculature Weak Spotted euxassay_006553_17
TS23: epidermis Moderate Regionally restricted euxassay_006553_17
TS23: heart ventricle Moderate Spotted euxassay_006553_17
TS23: inner ear Strong Regionally restricted euxassay_006553_17
Specimen euxassay_006553_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: external naris epithelium Strong Regionally restricted euxassay_006553_18
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_18
TS23: lung Strong Spotted euxassay_006553_18
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_18
TS23: lower jaw incisor Strong Regionally restricted euxassay_006553_18
TS23: tongue epithelium Strong Regionally restricted euxassay_006553_18
TS23: vertebral axis musculature Weak Spotted euxassay_006553_18
TS23: epidermis Moderate Regionally restricted euxassay_006553_18
TS23: heart ventricle Moderate Spotted euxassay_006553_18
TS23: inner ear Strong Regionally restricted euxassay_006553_18
Specimen euxassay_006553_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_19
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_006553_19
TS23: lung Moderate Spotted euxassay_006553_19
TS23: lower jaw molar Strong Regionally restricted euxassay_006553_19
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_19
TS23: vertebral axis musculature Weak Spotted euxassay_006553_19
TS23: epidermis Moderate Regionally restricted euxassay_006553_19
TS23: inner ear Strong Regionally restricted euxassay_006553_19
Specimen euxassay_006553_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_20
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_20
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_20
TS23: lung Moderate Spotted euxassay_006553_20
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_20
TS23: lower jaw molar Strong Regionally restricted euxassay_006553_20
TS23: upper jaw molar Strong Regionally restricted euxassay_006553_20
TS23: vertebral axis musculature Weak Spotted euxassay_006553_20
TS23: epidermis Moderate Regionally restricted euxassay_006553_20
Specimen euxassay_006553_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_21
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_21
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_21
TS23: lung Moderate Spotted euxassay_006553_21
TS23: oral epithelium Strong Regionally restricted euxassay_006553_21
TS23: vertebral axis musculature Weak Spotted euxassay_006553_21
TS23: epidermis Moderate Regionally restricted euxassay_006553_21
Specimen euxassay_006553_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_22
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_22
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_22
TS23: lung Moderate Spotted euxassay_006553_22
TS23: oral epithelium Moderate Regionally restricted euxassay_006553_22
TS23: vertebral axis musculature Weak Spotted euxassay_006553_22
TS23: epidermis Moderate Regionally restricted euxassay_006553_22
Specimen euxassay_006553_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_006553_23
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_006553_23
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006553_23
TS23: lung Moderate Spotted euxassay_006553_23
TS23: vertebral axis musculature Weak Spotted euxassay_006553_23
TS23: epidermis Moderate Regionally restricted euxassay_006553_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory