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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827854
Gene symbol: S100a9
Gene name: S100 calcium binding protein A9 (calgranulin B)
Probe: IMAGE clone 480712
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000521_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_01
TS23: cranium Weak Regionally restricted euxassay_000521_01
TS23: otic capsule Moderate Regionally restricted euxassay_000521_01
Specimen euxassay_000521_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_02
TS23: cranium Weak Regionally restricted euxassay_000521_02
TS23: otic capsule Moderate Regionally restricted euxassay_000521_02
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_02
Specimen euxassay_000521_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_03
TS23: cranium Weak Regionally restricted euxassay_000521_03
TS23: otic capsule Moderate Regionally restricted euxassay_000521_03
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_03
Specimen euxassay_000521_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_04
TS23: cranium Weak Regionally restricted euxassay_000521_04
Specimen euxassay_000521_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_05
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_05
Specimen euxassay_000521_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_06
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_06
Specimen euxassay_000521_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_07
TS23: cranium Strong Regionally restricted euxassay_000521_07
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_07
Specimen euxassay_000521_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_08
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_08
Specimen euxassay_000521_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_09
TS23: cranium Strong Regionally restricted euxassay_000521_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_09
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_000521_09
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_09
Specimen euxassay_000521_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_10
TS23: cranium Strong Regionally restricted euxassay_000521_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_10
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_000521_10
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_10
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_000521_10
Specimen euxassay_000521_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_11
TS23: cranium Strong Regionally restricted euxassay_000521_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_11
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_000521_11
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_11
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_000521_11
Specimen euxassay_000521_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_12
TS23: cranium Strong Regionally restricted euxassay_000521_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_12
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_000521_12
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_12
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_000521_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000521_12
Specimen euxassay_000521_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_13
TS23: cranium Strong Regionally restricted euxassay_000521_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_13
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_000521_13
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000521_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000521_13
Specimen euxassay_000521_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_14
TS23: cranium Strong Regionally restricted euxassay_000521_14
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_14
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_14
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000521_14
Specimen euxassay_000521_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_15
TS23: cranium Strong Regionally restricted euxassay_000521_15
TS23: otic capsule Moderate Regionally restricted euxassay_000521_15
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_15
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000521_15
Specimen euxassay_000521_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_16
TS23: cranium Strong Regionally restricted euxassay_000521_16
TS23: otic capsule Moderate Regionally restricted euxassay_000521_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_16
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000521_16
Specimen euxassay_000521_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_17
TS23: cranium Strong Regionally restricted euxassay_000521_17
TS23: otic capsule Moderate Regionally restricted euxassay_000521_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_17
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_000521_17
TS23: axial skeleton Moderate Regionally restricted euxassay_000521_17
TS23: lower jaw molar Moderate Regionally restricted euxassay_000521_17
Specimen euxassay_000521_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_18
TS23: cranium Strong Regionally restricted euxassay_000521_18
TS23: otic capsule Moderate Regionally restricted euxassay_000521_18
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_18
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_000521_18
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_000521_18
Specimen euxassay_000521_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_19
TS23: cranium Strong Regionally restricted euxassay_000521_19
TS23: otic capsule Moderate Regionally restricted euxassay_000521_19
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_19
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_000521_19
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_000521_19
Specimen euxassay_000521_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_20
TS23: cranium Strong Regionally restricted euxassay_000521_20
TS23: otic capsule Moderate Regionally restricted euxassay_000521_20
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000521_20
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_000521_20
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_20
Specimen euxassay_000521_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_21
TS23: cranium Strong Regionally restricted euxassay_000521_21
TS23: otic capsule Moderate Regionally restricted euxassay_000521_21
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_21
TS23: thoracic segment skeleton Moderate Regionally restricted euxassay_000521_21
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_21
Specimen euxassay_000521_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_22
TS23: cranium Strong Regionally restricted euxassay_000521_22
TS23: otic capsule Moderate Regionally restricted euxassay_000521_22
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_22
TS23: thoracic segment skeleton Weak Regionally restricted euxassay_000521_22
TS23: Meckel's cartilage Weak Regionally restricted euxassay_000521_22
Specimen euxassay_000521_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_23
TS23: cranium Strong Regionally restricted euxassay_000521_23
TS23: otic capsule Moderate Regionally restricted euxassay_000521_23
TS23: head mesenchyme Moderate Regionally restricted euxassay_000521_23
Specimen euxassay_000521_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Spotted euxassay_000521_24
TS23: cranium Strong Regionally restricted euxassay_000521_24
TS23: otic capsule Moderate Regionally restricted euxassay_000521_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory