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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827834
Gene symbol: Rundc3a
Gene name: RUN domain containing 3A
Probe: T30364
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011504_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_01
TS23: neural retina Moderate Regionally restricted euxassay_011504_01
Specimen euxassay_011504_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_02
TS23: neural retina Moderate Regionally restricted euxassay_011504_02
Specimen euxassay_011504_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_03
Specimen euxassay_011504_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_04
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_04
Specimen euxassay_011504_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_05
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_05
TS23: stomach Weak Spotted euxassay_011504_05
Specimen euxassay_011504_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_06
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011504_06
TS23: stomach Weak Spotted euxassay_011504_06
Specimen euxassay_011504_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_07
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011504_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011504_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_07
TS23: stomach Weak Spotted euxassay_011504_07
Specimen euxassay_011504_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011504_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011504_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_08
TS23: stomach Weak Spotted euxassay_011504_08
Specimen euxassay_011504_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_09
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011504_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_09
TS23: vagus ganglion Moderate Regionally restricted euxassay_011504_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011504_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_09
Specimen euxassay_011504_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_10
TS23: cervical ganglion Moderate Regionally restricted euxassay_011504_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_10
TS23: stomach Weak Spotted euxassay_011504_10
TS23: midgut Weak Spotted euxassay_011504_10
TS23: adrenal medulla Moderate Spotted euxassay_011504_10
Specimen euxassay_011504_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_11
TS23: spinal cord Moderate Regionally restricted euxassay_011504_11
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011504_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_11
TS23: vomeronasal organ Moderate Regionally restricted euxassay_011504_11
TS23: tongue Moderate Spotted euxassay_011504_11
TS23: midgut Weak Spotted euxassay_011504_11
TS23: stomach Weak Spotted euxassay_011504_11
TS23: adrenal medulla Moderate Spotted euxassay_011504_11
Specimen euxassay_011504_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_12
TS23: spinal cord Moderate Regionally restricted euxassay_011504_12
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011504_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_12
TS23: tongue Moderate Spotted euxassay_011504_12
TS23: midgut Weak Spotted euxassay_011504_12
TS23: adrenal medulla Moderate Regionally restricted euxassay_011504_12
Specimen euxassay_011504_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_13
TS23: spinal cord Moderate Regionally restricted euxassay_011504_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_13
TS23: midgut Weak Spotted euxassay_011504_13
TS23: adrenal medulla Moderate Regionally restricted euxassay_011504_13
Specimen euxassay_011504_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_14
TS23: spinal cord Moderate Regionally restricted euxassay_011504_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011504_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_14
TS23: vomeronasal organ Moderate Regionally restricted euxassay_011504_14
TS23: midgut Weak Spotted euxassay_011504_14
Specimen euxassay_011504_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_15
TS23: spinal cord Moderate Regionally restricted euxassay_011504_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011504_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_15
TS23: tongue Moderate Spotted euxassay_011504_15
TS23: midgut Weak Spotted euxassay_011504_15
Specimen euxassay_011504_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_16
TS23: spinal cord Moderate Regionally restricted euxassay_011504_16
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011504_16
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011504_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_16
TS23: midgut Weak Spotted euxassay_011504_16
Specimen euxassay_011504_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_17
TS23: spinal cord Moderate Regionally restricted euxassay_011504_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_17
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011504_17
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011504_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011504_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_011504_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_17
TS23: midgut Weak Spotted euxassay_011504_17
Specimen euxassay_011504_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_18
TS23: spinal cord Moderate Regionally restricted euxassay_011504_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011504_18
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011504_18
TS23: cervical ganglion Moderate Regionally restricted euxassay_011504_18
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011504_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011504_18
TS23: midgut Weak Spotted euxassay_011504_18
Specimen euxassay_011504_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_19
TS23: spinal cord Moderate Regionally restricted euxassay_011504_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011504_19
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_19
TS23: vagus ganglion Moderate Regionally restricted euxassay_011504_19
TS23: cervical ganglion Moderate Regionally restricted euxassay_011504_19
TS23: midgut Weak Spotted euxassay_011504_19
TS23: adrenal medulla Moderate Spotted euxassay_011504_19
Specimen euxassay_011504_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_20
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011504_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011504_20
TS23: midgut Weak Spotted euxassay_011504_20
TS23: adrenal medulla Moderate Spotted euxassay_011504_20
Specimen euxassay_011504_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_21
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_21
TS23: adrenal medulla Moderate Spotted euxassay_011504_21
Specimen euxassay_011504_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011504_22
TS23: facial ganglion Moderate Regionally restricted euxassay_011504_22
TS23: neural retina Moderate Regionally restricted euxassay_011504_22
Specimen euxassay_011504_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_23
TS23: neural retina Moderate Regionally restricted euxassay_011504_23
Specimen euxassay_011504_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_011504_24
TS23: neural retina Moderate Regionally restricted euxassay_011504_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory