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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827513
Gene symbol: Ptp4a1
Gene name: protein tyrosine phosphatase 4a1
Probe: T31760
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010021_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forebrain Weak Regionally restricted euxassay_010021_01
Specimen euxassay_010021_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_02
TS23: neural retina Weak Regionally restricted euxassay_010021_02
TS23: forebrain Weak Regionally restricted euxassay_010021_02
Specimen euxassay_010021_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_03
TS23: neural retina Weak Regionally restricted euxassay_010021_03
TS23: hindbrain Weak Regionally restricted euxassay_010021_03
TS23: forebrain Weak Regionally restricted euxassay_010021_03
Specimen euxassay_010021_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_04
TS23: neural retina Weak Regionally restricted euxassay_010021_04
TS23: hindbrain Weak Regionally restricted euxassay_010021_04
TS23: forebrain Weak Regionally restricted euxassay_010021_04
Specimen euxassay_010021_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_05
TS23: adrenal gland Weak Regionally restricted euxassay_010021_05
TS23: stomach Moderate Regionally restricted euxassay_010021_05
TS23: midbrain Weak Regionally restricted euxassay_010021_05
TS23: hindbrain Weak Regionally restricted euxassay_010021_05
TS23: forebrain Weak Regionally restricted euxassay_010021_05
Specimen euxassay_010021_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_06
TS23: adrenal gland Moderate Regionally restricted euxassay_010021_06
TS23: stomach Moderate Regionally restricted euxassay_010021_06
TS23: midbrain Weak Regionally restricted euxassay_010021_06
TS23: hindbrain Weak Regionally restricted euxassay_010021_06
TS23: forebrain Weak Regionally restricted euxassay_010021_06
Specimen euxassay_010021_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_07
TS23: adrenal gland Moderate Regionally restricted euxassay_010021_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010021_07
TS23: stomach Moderate Regionally restricted euxassay_010021_07
TS23: spinal cord Weak Regionally restricted euxassay_010021_07
TS23: midbrain Weak Regionally restricted euxassay_010021_07
TS23: hindbrain Weak Regionally restricted euxassay_010021_07
TS23: forebrain Weak Regionally restricted euxassay_010021_07
Specimen euxassay_010021_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010021_08
TS23: stomach Moderate Regionally restricted euxassay_010021_08
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_010021_08
TS23: cervical ganglion Weak Regionally restricted euxassay_010021_08
TS23: spinal cord Weak Regionally restricted euxassay_010021_08
TS23: midbrain Weak Regionally restricted euxassay_010021_08
TS23: hindbrain Weak Regionally restricted euxassay_010021_08
TS23: forebrain Weak Regionally restricted euxassay_010021_08
Specimen euxassay_010021_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010021_09
TS23: stomach Weak Regionally restricted euxassay_010021_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_010021_09
TS23: spinal cord Weak Regionally restricted euxassay_010021_09
TS23: midbrain Weak Regionally restricted euxassay_010021_09
TS23: hindbrain Weak Regionally restricted euxassay_010021_09
TS23: forebrain Weak Regionally restricted euxassay_010021_09
Specimen euxassay_010021_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_10
TS23: thoracic ganglion Weak Regionally restricted euxassay_010021_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010021_10
TS23: spinal cord Weak Regionally restricted euxassay_010021_10
TS23: hindbrain Weak Regionally restricted euxassay_010021_10
TS23: midbrain Weak Regionally restricted euxassay_010021_10
TS23: forebrain Weak Regionally restricted euxassay_010021_10
Specimen euxassay_010021_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_11
TS23: thoracic ganglion Weak Regionally restricted euxassay_010021_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010021_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_010021_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_010021_11
TS23: bladder wall Weak Regionally restricted euxassay_010021_11
TS23: spinal cord Weak Regionally restricted euxassay_010021_11
TS23: midbrain Weak Regionally restricted euxassay_010021_11
TS23: hindbrain Weak Regionally restricted euxassay_010021_11
TS23: forebrain Weak Regionally restricted euxassay_010021_11
Specimen euxassay_010021_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010021_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_010021_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_010021_12
TS23: bladder wall Weak Regionally restricted euxassay_010021_12
TS23: spinal cord Weak Regionally restricted euxassay_010021_12
TS23: midbrain Weak Regionally restricted euxassay_010021_12
TS23: hindbrain Weak Regionally restricted euxassay_010021_12
TS23: forebrain Weak Regionally restricted euxassay_010021_12
Specimen euxassay_010021_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010021_13
TS23: bladder wall Weak Regionally restricted euxassay_010021_13
TS23: midbrain Weak Regionally restricted euxassay_010021_13
TS23: hindbrain Weak Regionally restricted euxassay_010021_13
TS23: forebrain Weak Regionally restricted euxassay_010021_13
TS23: spinal cord Weak Regionally restricted euxassay_010021_13
Specimen euxassay_010021_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_14
TS23: adrenal gland Weak Regionally restricted euxassay_010021_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_010021_14
TS23: bladder wall Weak Regionally restricted euxassay_010021_14
TS23: midbrain Weak Regionally restricted euxassay_010021_14
TS23: hindbrain Weak Regionally restricted euxassay_010021_14
TS23: forebrain Weak Regionally restricted euxassay_010021_14
Specimen euxassay_010021_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_15
TS23: adrenal gland Weak Regionally restricted euxassay_010021_15
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_010021_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_010021_15
TS23: upper jaw incisor Weak Regionally restricted euxassay_010021_15
TS23: lower jaw incisor Weak Regionally restricted euxassay_010021_15
TS23: midbrain Weak Regionally restricted euxassay_010021_15
TS23: hindbrain Weak Regionally restricted euxassay_010021_15
TS23: forebrain Weak Regionally restricted euxassay_010021_15
Specimen euxassay_010021_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_16
TS23: cervical ganglion Weak Regionally restricted euxassay_010021_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010021_16
TS23: upper jaw incisor Weak Regionally restricted euxassay_010021_16
TS23: lower jaw incisor Weak Regionally restricted euxassay_010021_16
TS23: midbrain Weak Regionally restricted euxassay_010021_16
TS23: hindbrain Weak Regionally restricted euxassay_010021_16
TS23: forebrain Weak Regionally restricted euxassay_010021_16
Specimen euxassay_010021_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_010021_17
TS23: midbrain Weak Regionally restricted euxassay_010021_17
TS23: hindbrain Weak Regionally restricted euxassay_010021_17
TS23: forebrain Weak Regionally restricted euxassay_010021_17
Specimen euxassay_010021_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010021_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_010021_18
TS23: midbrain Weak Regionally restricted euxassay_010021_18
TS23: hindbrain Weak Regionally restricted euxassay_010021_18
TS23: forebrain Weak Regionally restricted euxassay_010021_18
Specimen euxassay_010021_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010021_19
TS23: hindbrain Weak Regionally restricted euxassay_010021_19
TS23: forebrain Weak Regionally restricted euxassay_010021_19
Specimen euxassay_010021_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_20
TS23: forebrain Weak Regionally restricted euxassay_010021_20
TS23: hindbrain Weak Regionally restricted euxassay_010021_20
Specimen euxassay_010021_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_21
TS23: forebrain Moderate Regionally restricted euxassay_010021_21
TS23: hindbrain Weak Regionally restricted euxassay_010021_21
Specimen euxassay_010021_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_22
TS23: forebrain Moderate Regionally restricted euxassay_010021_22
Specimen euxassay_010021_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_010021_23
TS23: neural retina Weak Regionally restricted euxassay_010021_23
TS23: forebrain Moderate Regionally restricted euxassay_010021_23
Specimen euxassay_010021_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_010021_24
TS23: forebrain Moderate Regionally restricted euxassay_010021_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory