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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827225
Gene symbol: Pitx2
Gene name: paired-like homeodomain transcription factor 2
Probe: T55145
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S8: embryonic day 14.5 (more )
Note: The annotations provided in this table refer to the entire set of Eurexpress images; thus the displayed image may not include the structures referred to in the annotations.
Structure Level Pattern Image Note
TS23: neocortex Absent euxassay_019470_12
TS23: hippocampus Absent euxassay_019470_12
TS23: corpus striatum Absent euxassay_019470_12
TS23: telencephalon septum Absent euxassay_019470_12
TS23: thalamus Moderate euxassay_019470_12
TS23: hypothalamus Strong euxassay_019470_12
TS23: pretectum Absent euxassay_019470_12
TS23: superior colliculus Strong euxassay_019470_12
TS23: inferior colliculus Weak euxassay_019470_12
TS23: midbrain tegmentum Absent euxassay_019470_12
TS23: cerebellum Absent euxassay_019470_12
TS23: spinal cord Weak euxassay_019470_12
TS23: skin Absent euxassay_019470_12
TS23: lung Absent euxassay_019470_12
TS23: metanephros Absent euxassay_019470_12
TS23: liver Absent euxassay_019470_12
TS23: thyroid gland Strong euxassay_019470_12
TS23: pituitary gland Absent euxassay_019470_12
TS23: pancreas Absent euxassay_019470_12
TS23: adrenal gland Absent euxassay_019470_12
TS23: heart Absent euxassay_019470_12
TS23: thymus primordium Absent euxassay_019470_12
TS23: vertebral axis musculature Absent euxassay_019470_12
TS23: axial skeleton Strong euxassay_019470_12
Specimen euxassay_019470_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_019470_02
Specimen euxassay_019470_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_019470_03
Specimen euxassay_019470_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_019470_04
Specimen euxassay_019470_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_019470_05
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_019470_05
Specimen euxassay_019470_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_019470_06
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_019470_06
TS23: trigeminal nerve Weak Regionally restricted euxassay_019470_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_06
Specimen euxassay_019470_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_019470_07
TS23: perioptic mesenchyme Moderate Regionally restricted euxassay_019470_07
TS23: trigeminal nerve Moderate Regionally restricted euxassay_019470_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_07
Specimen euxassay_019470_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Strong Regionally restricted euxassay_019470_08
TS23: lower jaw molar Strong Regionally restricted euxassay_019470_08
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_019470_08
TS23: trigeminal nerve Moderate Regionally restricted euxassay_019470_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_08
TS23: pectoralis major Weak Regionally restricted euxassay_019470_08
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_08
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_08
Specimen euxassay_019470_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw molar Strong Regionally restricted euxassay_019470_09
TS23: upper jaw molar Strong Regionally restricted euxassay_019470_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_09
TS23: pectoralis major Weak Regionally restricted euxassay_019470_09
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_09
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_09
Specimen euxassay_019470_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw molar Strong Regionally restricted euxassay_019470_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_10
TS23: pectoralis major Weak Regionally restricted euxassay_019470_10
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_10
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_10
Specimen euxassay_019470_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Strong Regionally restricted euxassay_019470_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_11
TS23: foot mesenchyme Weak Regionally restricted euxassay_019470_11
TS23: pectoralis minor Moderate Regionally restricted euxassay_019470_11
TS23: pectoralis major Moderate Regionally restricted euxassay_019470_11
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_11
Specimen euxassay_019470_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Strong Regionally restricted euxassay_019470_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_12
TS23: foot mesenchyme Weak Regionally restricted euxassay_019470_12
TS23: pectoralis major Weak Regionally restricted euxassay_019470_12
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_12
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_12
Specimen euxassay_019470_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_019470_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_019470_13
TS23: pituitary gland Strong Regionally restricted euxassay_019470_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_13
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_13
TS23: pectoralis major Weak Regionally restricted euxassay_019470_13
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_13
Specimen euxassay_019470_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_019470_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_019470_14
TS23: pituitary gland Strong Regionally restricted euxassay_019470_14
TS23: tongue muscle Weak Regionally restricted euxassay_019470_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_14
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_14
TS23: pectoralis major Weak Regionally restricted euxassay_019470_14
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_14
Specimen euxassay_019470_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_019470_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_019470_15
TS23: pituitary gland Strong Regionally restricted euxassay_019470_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_15
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_15
TS23: tail mesenchyme Weak Regionally restricted euxassay_019470_15
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_15
Specimen euxassay_019470_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Moderate Regionally restricted euxassay_019470_16
TS23: tongue muscle Weak Regionally restricted euxassay_019470_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_16
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_16
TS23: tail mesenchyme Weak Regionally restricted euxassay_019470_16
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_16
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_16
TS23: pectoralis major Weak Regionally restricted euxassay_019470_16
Specimen euxassay_019470_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Strong Regionally restricted euxassay_019470_17
TS23: tongue muscle Weak Regionally restricted euxassay_019470_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_17
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_17
TS23: tail mesenchyme Weak Regionally restricted euxassay_019470_17
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_17
TS23: pectoralis major Weak Regionally restricted euxassay_019470_17
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_17
Specimen euxassay_019470_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_019470_18
TS23: lower jaw incisor Strong Regionally restricted euxassay_019470_18
TS23: pituitary gland Strong Regionally restricted euxassay_019470_18
TS23: tongue muscle Weak Regionally restricted euxassay_019470_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019470_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_18
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_18
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_18
TS23: pectoralis major Weak Regionally restricted euxassay_019470_18
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_18
Specimen euxassay_019470_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_019470_19
TS23: lower jaw incisor Strong Regionally restricted euxassay_019470_19
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_019470_19
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_19
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_19
Specimen euxassay_019470_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Strong Regionally restricted euxassay_019470_20
TS23: lower jaw incisor Strong Regionally restricted euxassay_019470_20
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019470_20
TS23: pectoralis major Weak Regionally restricted euxassay_019470_20
TS23: pectoralis minor Weak Regionally restricted euxassay_019470_20
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_20
Specimen euxassay_019470_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_21
Specimen euxassay_019470_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw molar Strong Regionally restricted euxassay_019470_22
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_019470_22
Specimen euxassay_019470_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw molar Strong Regionally restricted euxassay_019470_23
TS23: upper jaw molar Strong Regionally restricted euxassay_019470_23
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_019470_23
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_23
Specimen euxassay_019470_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Strong Regionally restricted euxassay_019470_24
TS23: lower jaw molar Strong Regionally restricted euxassay_019470_24
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_019470_24
TS23: foot mesenchyme Weak Regionally restricted euxassay_019470_24
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_019470_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory