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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827066
Gene symbol: Pax7
Gene name: paired box 7
Probe: DA74 probe 73
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019450_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_02
Specimen euxassay_019450_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_03
TS23: lung Weak Regionally restricted euxassay_019450_03
Specimen euxassay_019450_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_04
TS23: lung Weak Regionally restricted euxassay_019450_04
TS23: foot mesenchyme Weak Regionally restricted euxassay_019450_04
Specimen euxassay_019450_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_05
TS23: lung Weak Regionally restricted euxassay_019450_05
TS23: foot mesenchyme Moderate Regionally restricted euxassay_019450_05
Specimen euxassay_019450_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_06
TS23: lung Moderate Regionally restricted euxassay_019450_06
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019450_06
TS23: foot mesenchyme Weak Regionally restricted euxassay_019450_06
Specimen euxassay_019450_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_07
TS23: lung Moderate Regionally restricted euxassay_019450_07
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019450_07
Specimen euxassay_019450_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_08
TS23: lung Weak Regionally restricted euxassay_019450_08
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019450_08
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_019450_08
Specimen euxassay_019450_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019450_09
TS23: lung Moderate Regionally restricted euxassay_019450_09
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019450_09
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_019450_09
Specimen euxassay_019450_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019450_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_10
TS23: pons mantle layer Strong Regionally restricted euxassay_019450_10
TS23: lung Weak Regionally restricted euxassay_019450_10
TS23: nasal cavity epithelium Weak Regionally restricted euxassay_019450_10
Specimen euxassay_019450_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019450_11
TS23: pons mantle layer Strong Regionally restricted euxassay_019450_11
TS23: lung Weak Regionally restricted euxassay_019450_11
TS23: nasal cavity epithelium Weak Regionally restricted euxassay_019450_11
Specimen euxassay_019450_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019450_12
TS23: pons mantle layer Strong Regionally restricted euxassay_019450_12
TS23: tail mesenchyme Weak Regionally restricted euxassay_019450_12
Specimen euxassay_019450_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_13
TS23: pons mantle layer Strong Regionally restricted euxassay_019450_13
TS23: lung Moderate Regionally restricted euxassay_019450_13
TS23: urethra Weak Regionally restricted euxassay_019450_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: tail mesenchyme Weak Regionally restricted euxassay_019450_13
Specimen euxassay_019450_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019450_14
TS23: pons mantle layer Strong Regionally restricted euxassay_019450_14
TS23: lung Moderate Regionally restricted euxassay_019450_14
TS23: urethra Weak Regionally restricted euxassay_019450_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: tail mesenchyme Weak Regionally restricted euxassay_019450_14
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_019450_14
Specimen euxassay_019450_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019450_15
TS23: pons mantle layer Strong Regionally restricted euxassay_019450_15
TS23: lung Moderate Regionally restricted euxassay_019450_15
TS23: tail mesenchyme Weak Regionally restricted euxassay_019450_15
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_019450_15
Specimen euxassay_019450_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_16
TS23: lung Weak Regionally restricted euxassay_019450_16
TS23: tail mesenchyme Weak Regionally restricted euxassay_019450_16
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019450_16
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_019450_16
Specimen euxassay_019450_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_17
TS23: lung Moderate Regionally restricted euxassay_019450_17
TS23: tail mesenchyme Weak Regionally restricted euxassay_019450_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_019450_17
Specimen euxassay_019450_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019450_18
TS23: lung Moderate Regionally restricted euxassay_019450_18
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019450_18
Specimen euxassay_019450_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_019450_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_19
TS23: lung Moderate Regionally restricted euxassay_019450_19
Specimen euxassay_019450_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_019450_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019450_20
TS23: lung Weak Regionally restricted euxassay_019450_20
TS23: foot mesenchyme Weak Regionally restricted euxassay_019450_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory