About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826760
Gene symbol: Npc2
Gene name: NPC intracellular cholesterol transporter 2
Probe: IMAGE clone 1890275
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001964_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_01
TS23: stomach Moderate Regionally restricted euxassay_001964_01
Specimen euxassay_001964_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_02
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_02
TS23: stomach Moderate Regionally restricted euxassay_001964_02
Specimen euxassay_001964_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_03
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_03
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_03
TS23: stomach Strong Regionally restricted euxassay_001964_03
Specimen euxassay_001964_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_04
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_04
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_04
TS23: stomach Strong Regionally restricted euxassay_001964_04
Specimen euxassay_001964_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_05
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_001964_05 trigeminal motor nucleus
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_001964_05
TS23: stomach Strong Regionally restricted euxassay_001964_05
Specimen euxassay_001964_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_06
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_06
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_06
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_001964_06
TS23: stomach Strong Regionally restricted euxassay_001964_06
Specimen euxassay_001964_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_07
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_07 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_001964_07
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_07
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001964_07
TS23: cervical ganglion Moderate Regionally restricted euxassay_001964_07
TS23: stomach Strong Regionally restricted euxassay_001964_07
Specimen euxassay_001964_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_08
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_08 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_08
TS23: stomach Strong Regionally restricted euxassay_001964_08
Specimen euxassay_001964_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_09
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_09
Specimen euxassay_001964_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_10
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_10
TS23: trachea Moderate Regionally restricted euxassay_001964_10
Specimen euxassay_001964_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_11
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_11
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001964_11
TS23: trachea Moderate Regionally restricted euxassay_001964_11
Specimen euxassay_001964_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_12
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_12
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_12
Specimen euxassay_001964_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_13
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_13
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001964_13
Specimen euxassay_001964_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_14
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_14
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_14 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_14
Specimen euxassay_001964_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_15
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_15 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_15
TS23: cervical ganglion Moderate Regionally restricted euxassay_001964_15
Specimen euxassay_001964_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_16
Specimen euxassay_001964_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_001964_17 trigeminal motor nucleus
Specimen euxassay_001964_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_001964_18 trigeminal motor nucleus
Specimen euxassay_001964_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_19
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_19
Specimen euxassay_001964_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_20
Specimen euxassay_001964_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_21
Specimen euxassay_001964_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory