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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825662
Gene symbol: Itih5
Gene name: inter-alpha-trypsin inhibitor, heavy chain 5
Probe: T30359
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013596_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: carpus Moderate Regionally restricted euxassay_013596_01
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_013596_01
TS23: forearm rest of mesenchyme Moderate Regionally restricted euxassay_013596_01
Specimen euxassay_013596_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_02
TS23: cranial musculature Weak Regionally restricted euxassay_013596_02
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013596_02
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_013596_02
TS23: forearm rest of mesenchyme Moderate Regionally restricted euxassay_013596_02
TS23: carpus Moderate Regionally restricted euxassay_013596_02
Specimen euxassay_013596_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_03
TS23: diaphragm Weak Regionally restricted euxassay_013596_03
TS23: cranial musculature Weak Regionally restricted euxassay_013596_03
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013596_03
TS23: carpus Moderate Regionally restricted euxassay_013596_03
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_013596_03
Specimen euxassay_013596_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Weak Regionally restricted euxassay_013596_04
TS23: diaphragm Weak Regionally restricted euxassay_013596_04
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_013596_04
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_013596_04
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_013596_04
TS23: interdigital region between forelimb digits 1 and 2 Moderate Regionally restricted euxassay_013596_04
TS23: cranial musculature Weak Regionally restricted euxassay_013596_04
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013596_04
TS23: carpus Moderate Regionally restricted euxassay_013596_04
TS23: stomach Weak Regionally restricted euxassay_013596_04
Specimen euxassay_013596_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_05
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_05
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_013596_05
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_013596_05
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_013596_05
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_013596_05
TS23: interdigital region between forelimb digits 1 and 2 Moderate Regionally restricted euxassay_013596_05
TS23: interdigital region between forelimb digits 2 and 3 Moderate Regionally restricted euxassay_013596_05
TS23: cranial musculature Weak Regionally restricted euxassay_013596_05
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013596_05
TS23: stomach Weak Regionally restricted euxassay_013596_05
Specimen euxassay_013596_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_06
TS23: saccule Moderate Regionally restricted euxassay_013596_06
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_06
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_06
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_013596_06
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_013596_06
TS23: cranial musculature Weak Regionally restricted euxassay_013596_06
TS23: stomach Weak Regionally restricted euxassay_013596_06
Specimen euxassay_013596_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_07
TS23: saccule Strong Regionally restricted euxassay_013596_07
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_07
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_07
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_07
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_07
TS23: diaphragm Weak Regionally restricted euxassay_013596_07
TS23: cranial musculature Weak Regionally restricted euxassay_013596_07
TS23: stomach Weak Regionally restricted euxassay_013596_07
Specimen euxassay_013596_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_08
TS23: saccule Strong Regionally restricted euxassay_013596_08
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_08
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_08
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_08
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_08
TS23: diaphragm Weak Regionally restricted euxassay_013596_08
TS23: stomach Weak Regionally restricted euxassay_013596_08
Specimen euxassay_013596_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_09
TS23: saccule Strong Regionally restricted euxassay_013596_09
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_09
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_09
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_09
TS23: stomach Weak Regionally restricted euxassay_013596_09
Specimen euxassay_013596_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_10
TS23: saccule Strong Regionally restricted euxassay_013596_10
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_10
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_10
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_10
Specimen euxassay_013596_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013596_11
TS23: saccule Strong Regionally restricted euxassay_013596_11
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_11
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_11
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_11
TS23: nasal septum Weak Regionally restricted euxassay_013596_11
Specimen euxassay_013596_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_12
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_12
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_12
TS23: diaphragm Weak Regionally restricted euxassay_013596_12
TS23: nasal septum Moderate Regionally restricted euxassay_013596_12
Specimen euxassay_013596_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_13
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_13
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_13
TS23: diaphragm Weak Regionally restricted euxassay_013596_13
TS23: nasal septum Moderate Regionally restricted euxassay_013596_13
TS23: heart valve Weak Regionally restricted euxassay_013596_13
Specimen euxassay_013596_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_14
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_14
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_14
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_14
TS23: diaphragm Weak Regionally restricted euxassay_013596_14
TS23: nasal septum Weak Regionally restricted euxassay_013596_14
TS23: bladder Weak Regionally restricted euxassay_013596_14
TS23: heart valve Weak Regionally restricted euxassay_013596_14
Specimen euxassay_013596_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_15
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_15
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_15
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_15
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_15
TS23: diaphragm Moderate Regionally restricted euxassay_013596_15
TS23: nasal septum Moderate Regionally restricted euxassay_013596_15
TS23: bladder Moderate Regionally restricted euxassay_013596_15
TS23: heart valve Weak Regionally restricted euxassay_013596_15
TS23: esophagus Weak Regionally restricted euxassay_013596_15
Specimen euxassay_013596_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_16
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_16
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_16
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_16
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_16
TS23: diaphragm Moderate Regionally restricted euxassay_013596_16
TS23: nasal septum Moderate Regionally restricted euxassay_013596_16
TS23: bladder Weak Regionally restricted euxassay_013596_16
TS23: heart valve Moderate Regionally restricted euxassay_013596_16
TS23: esophagus Weak Regionally restricted euxassay_013596_16
Specimen euxassay_013596_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_17
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_17
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_17
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_17
TS23: diaphragm Moderate Regionally restricted euxassay_013596_17
TS23: nasal septum Moderate Regionally restricted euxassay_013596_17
TS23: bladder Moderate Regionally restricted euxassay_013596_17
Specimen euxassay_013596_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_18
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_18
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_18
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_18
TS23: diaphragm Moderate Regionally restricted euxassay_013596_18
Specimen euxassay_013596_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013596_19
TS23: saccule Strong Regionally restricted euxassay_013596_19
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_19
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_19
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_19
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_19
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_19
TS23: diaphragm Moderate Regionally restricted euxassay_013596_19
Specimen euxassay_013596_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013596_20
TS23: saccule Strong Regionally restricted euxassay_013596_20
TS23: spinal cord meninges Moderate Regionally restricted euxassay_013596_20
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_20
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_20
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_20
TS23: diencephalon meninges Moderate Regionally restricted euxassay_013596_20
TS23: diaphragm Weak Regionally restricted euxassay_013596_20
Specimen euxassay_013596_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_21
TS23: saccule Moderate Regionally restricted euxassay_013596_21
TS23: midbrain meninges Moderate Regionally restricted euxassay_013596_21
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_21
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_21
TS23: diaphragm Weak Regionally restricted euxassay_013596_21
TS23: foot mesenchyme Moderate Regionally restricted euxassay_013596_21
Specimen euxassay_013596_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_22
TS23: saccule Strong Regionally restricted euxassay_013596_22
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_22
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_22
TS23: diaphragm Weak Regionally restricted euxassay_013596_22
TS23: foot mesenchyme Moderate Regionally restricted euxassay_013596_22
Specimen euxassay_013596_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_013596_23
TS23: saccule Moderate Regionally restricted euxassay_013596_23
TS23: hindbrain meninges Moderate Regionally restricted euxassay_013596_23
TS23: telencephalon meninges Moderate Regionally restricted euxassay_013596_23
TS23: diaphragm Weak Regionally restricted euxassay_013596_23
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_013596_23
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_013596_23
TS23: cranial musculature Weak Regionally restricted euxassay_013596_23
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013596_23
Specimen euxassay_013596_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Weak Regionally restricted euxassay_013596_24
TS23: hindbrain meninges Weak Regionally restricted euxassay_013596_24
TS23: diaphragm Weak Regionally restricted euxassay_013596_24
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_013596_24
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_013596_24
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_013596_24
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_013596_24
TS23: cranial musculature Moderate Regionally restricted euxassay_013596_24
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013596_24
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory