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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825641
Gene symbol: Itga3
Gene name: integrin alpha 3
Probe: T30566
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010457_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_01
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_01
TS23: epidermis Weak Regionally restricted euxassay_010457_01
Specimen euxassay_010457_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_02
TS23: lung Moderate Regionally restricted euxassay_010457_02
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_02
TS23: epidermis Weak Regionally restricted euxassay_010457_02
Specimen euxassay_010457_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_03
TS23: lung Moderate Regionally restricted euxassay_010457_03
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_03
TS23: epidermis Weak Regionally restricted euxassay_010457_03
Specimen euxassay_010457_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_04
TS23: facial ganglion Moderate Regionally restricted euxassay_010457_04
TS23: lung Moderate Regionally restricted euxassay_010457_04
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_04
TS23: epidermis Weak Regionally restricted euxassay_010457_04
TS23: peritoneum Weak Regionally restricted euxassay_010457_04
Specimen euxassay_010457_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_05
TS23: facial ganglion Moderate Regionally restricted euxassay_010457_05
TS23: lung Moderate Regionally restricted euxassay_010457_05
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_05
TS23: epidermis Weak Regionally restricted euxassay_010457_05
TS23: peritoneum Weak Regionally restricted euxassay_010457_05
Specimen euxassay_010457_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_010457_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010457_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_06
TS23: facial ganglion Moderate Regionally restricted euxassay_010457_06
TS23: lung Moderate Regionally restricted euxassay_010457_06
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_06
TS23: vibrissa Weak Regionally restricted euxassay_010457_06
TS23: epidermis Weak Regionally restricted euxassay_010457_06
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_06
TS23: peritoneum Weak Regionally restricted euxassay_010457_06
Specimen euxassay_010457_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010457_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_07
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_07
TS23: lung Moderate Regionally restricted euxassay_010457_07
TS23: epidermis Weak Regionally restricted euxassay_010457_07
TS23: vibrissa Weak Regionally restricted euxassay_010457_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_07
TS23: peritoneum Weak Regionally restricted euxassay_010457_07
Specimen euxassay_010457_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010457_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_010457_08 trigeminal motor nucleus
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_010457_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_010457_08
TS23: lung Moderate Regionally restricted euxassay_010457_08
TS23: epidermis Weak Regionally restricted euxassay_010457_08
TS23: vibrissa Weak Regionally restricted euxassay_010457_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_08
TS23: peritoneum Weak Regionally restricted euxassay_010457_08
Specimen euxassay_010457_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010457_09 facial motor nucleus
TS23: upper jaw molar Moderate Regionally restricted euxassay_010457_09
TS23: lower jaw molar Moderate Regionally restricted euxassay_010457_09
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_09
TS23: lung Moderate Regionally restricted euxassay_010457_09
TS23: epidermis Weak Regionally restricted euxassay_010457_09
TS23: vibrissa Weak Regionally restricted euxassay_010457_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_09
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_09
TS23: peritoneum Weak Regionally restricted euxassay_010457_09
Specimen euxassay_010457_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010457_10 facial motor nucleus
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_10
TS23: lung Moderate Regionally restricted euxassay_010457_10
TS23: epidermis Weak Regionally restricted euxassay_010457_10
TS23: sublingual gland primordium Moderate Regionally restricted euxassay_010457_10
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_10
TS23: thyroid gland Weak Regionally restricted euxassay_010457_10
TS23: peritoneum Weak Regionally restricted euxassay_010457_10
Specimen euxassay_010457_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010457_11
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_11
TS23: lung Moderate Regionally restricted euxassay_010457_11
TS23: epidermis Weak Regionally restricted euxassay_010457_11
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_11
TS23: thyroid gland Moderate Regionally restricted euxassay_010457_11
TS23: peritoneum Weak Regionally restricted euxassay_010457_11
Specimen euxassay_010457_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010457_12
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_12
TS23: lung Moderate Regionally restricted euxassay_010457_12
TS23: epidermis Weak Regionally restricted euxassay_010457_12
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_12
TS23: esophagus Weak Regionally restricted euxassay_010457_12
TS23: trachea Weak Regionally restricted euxassay_010457_12
TS23: peritoneum Weak Regionally restricted euxassay_010457_12
Specimen euxassay_010457_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010457_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_010457_13
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_13
TS23: lung Moderate Regionally restricted euxassay_010457_13
TS23: epidermis Weak Regionally restricted euxassay_010457_13
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_13
TS23: esophagus Weak Regionally restricted euxassay_010457_13
TS23: trachea Weak Regionally restricted euxassay_010457_13
TS23: bladder fundus Weak Regionally restricted euxassay_010457_13
TS23: naris Weak Regionally restricted euxassay_010457_13
TS23: peritoneum Weak Regionally restricted euxassay_010457_13
Specimen euxassay_010457_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_14
TS23: lung Moderate Regionally restricted euxassay_010457_14
TS23: epidermis Weak Regionally restricted euxassay_010457_14
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_14
TS23: bladder fundus Weak Regionally restricted euxassay_010457_14
TS23: nephric duct of male Weak Regionally restricted euxassay_010457_14
TS23: naris Weak Regionally restricted euxassay_010457_14
TS23: thyroid gland Moderate Regionally restricted euxassay_010457_14
TS23: peritoneum Weak Regionally restricted euxassay_010457_14
Specimen euxassay_010457_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010457_15 facial motor nucleus
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_15
TS23: lung Moderate Regionally restricted euxassay_010457_15
TS23: epidermis Weak Regionally restricted euxassay_010457_15
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_15
TS23: urethra Weak Regionally restricted euxassay_010457_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: bladder fundus Weak Regionally restricted euxassay_010457_15
TS23: nephric duct of male Weak Regionally restricted euxassay_010457_15
TS23: naris Weak Regionally restricted euxassay_010457_15
TS23: thyroid gland Moderate Regionally restricted euxassay_010457_15
TS23: peritoneum Weak Regionally restricted euxassay_010457_15
Specimen euxassay_010457_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010457_16 facial motor nucleus
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010457_16
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_16
TS23: lung Weak Regionally restricted euxassay_010457_16
TS23: epidermis Weak Regionally restricted euxassay_010457_16
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_16
TS23: urethra Weak Regionally restricted euxassay_010457_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: bladder fundus Weak Regionally restricted euxassay_010457_16
TS23: naris Weak Regionally restricted euxassay_010457_16
TS23: peritoneum Weak Regionally restricted euxassay_010457_16
Specimen euxassay_010457_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010457_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010457_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_010457_17
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_17
TS23: lung Weak Regionally restricted euxassay_010457_17
TS23: epidermis Weak Regionally restricted euxassay_010457_17
TS23: sublingual gland primordium Moderate Regionally restricted euxassay_010457_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_17
TS23: peritoneum Weak Regionally restricted euxassay_010457_17
Specimen euxassay_010457_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010457_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_010457_18 trigeminal motor nucleus
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010457_18
TS23: upper jaw incisor Moderate Regionally restricted euxassay_010457_18
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_18
TS23: lung Moderate Regionally restricted euxassay_010457_18
TS23: epidermis Weak Regionally restricted euxassay_010457_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_18
TS23: ventral grey horn Weak Regionally restricted euxassay_010457_18
TS23: naris Weak Regionally restricted euxassay_010457_18
TS23: peritoneum Weak Regionally restricted euxassay_010457_18
Specimen euxassay_010457_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_010457_19
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_19
TS23: lung Moderate Regionally restricted euxassay_010457_19
TS23: epidermis Weak Regionally restricted euxassay_010457_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_19
TS23: peritoneum Weak Regionally restricted euxassay_010457_19
Specimen euxassay_010457_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_20
TS23: lower jaw molar Weak Regionally restricted euxassay_010457_20
TS23: oral epithelium Weak Regionally restricted euxassay_010457_20
TS23: upper jaw molar Weak Regionally restricted euxassay_010457_20
TS23: lung Moderate Regionally restricted euxassay_010457_20
TS23: epidermis Weak Regionally restricted euxassay_010457_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010457_20
TS23: peritoneum Weak Regionally restricted euxassay_010457_20
Specimen euxassay_010457_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_010457_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_21
TS23: facial ganglion Moderate Regionally restricted euxassay_010457_21
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_21
TS23: lung Moderate Regionally restricted euxassay_010457_21
TS23: vibrissa Weak Regionally restricted euxassay_010457_21
TS23: epidermis Weak Regionally restricted euxassay_010457_21
TS23: peritoneum Weak Regionally restricted euxassay_010457_21
Specimen euxassay_010457_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_010457_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_22
TS23: oral epithelium Moderate Regionally restricted euxassay_010457_22
TS23: lung Moderate Regionally restricted euxassay_010457_22
TS23: epidermis Weak Regionally restricted euxassay_010457_22
TS23: vibrissa Weak Regionally restricted euxassay_010457_22
TS23: peritoneum Weak Regionally restricted euxassay_010457_22
Specimen euxassay_010457_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010457_23
TS23: lung Moderate Regionally restricted euxassay_010457_23
TS23: epidermis Weak Regionally restricted euxassay_010457_23
TS23: vibrissa Weak Regionally restricted euxassay_010457_23
Specimen euxassay_010457_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_010457_24
TS23: lung Weak Regionally restricted euxassay_010457_24
TS23: cornea epithelium Moderate Regionally restricted euxassay_010457_24
TS23: vibrissa Weak Regionally restricted euxassay_010457_24
TS23: epidermis Weak Regionally restricted euxassay_010457_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory