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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825422
Gene symbol: Hoxa9
Gene name: homeobox A9
Probe: MH963 probe 476
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007185_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_01
Specimen euxassay_007185_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_02
Specimen euxassay_007185_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_03
Specimen euxassay_007185_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_04
Specimen euxassay_007185_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_05
Specimen euxassay_007185_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_06
Specimen euxassay_007185_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_07
Specimen euxassay_007185_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_08
Specimen euxassay_007185_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_09
Specimen euxassay_007185_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_10
Specimen euxassay_007185_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_11
Specimen euxassay_007185_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_12
Specimen euxassay_007185_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_13
Specimen euxassay_007185_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_14
Specimen euxassay_007185_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_15
Specimen euxassay_007185_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_16
Specimen euxassay_007185_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_17
Specimen euxassay_007185_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_18
Specimen euxassay_007185_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_19
Specimen euxassay_007185_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_20
Specimen euxassay_007185_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_21
Specimen euxassay_007185_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_22
Specimen euxassay_007185_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_23
Specimen euxassay_007185_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_007185_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory