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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825382
Gene symbol: Hkdc1
Gene name: hexokinase domain containing 1
Probe: MGC clone 28816
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003023_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_01
TS23: neural retina Moderate Single cells euxassay_003023_01
Specimen euxassay_003023_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_02
TS23: neural retina Moderate Single cells euxassay_003023_02
Specimen euxassay_003023_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_03
TS23: stomach Moderate Regionally restricted euxassay_003023_03
TS23: neural retina Moderate Single cells euxassay_003023_03
Specimen euxassay_003023_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_04
TS23: stomach Moderate Regionally restricted euxassay_003023_04
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_04
TS23: neural retina Moderate Single cells euxassay_003023_04
Specimen euxassay_003023_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_05
TS23: stomach Strong Regionally restricted euxassay_003023_05
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_05
TS23: neural retina Moderate Single cells euxassay_003023_05
Specimen euxassay_003023_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_06
TS23: stomach Strong Regionally restricted euxassay_003023_06
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_06
Specimen euxassay_003023_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_07
TS23: stomach Strong Regionally restricted euxassay_003023_07
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_07
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_07
Specimen euxassay_003023_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_08
TS23: stomach Strong Regionally restricted euxassay_003023_08
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_08
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_08
Specimen euxassay_003023_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_09
TS23: renal calyx Strong Regionally restricted euxassay_003023_09
TS23: stomach Strong Regionally restricted euxassay_003023_09
TS23: midgut Strong Regionally restricted euxassay_003023_09
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_09
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_09
Specimen euxassay_003023_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_10
TS23: renal calyx Strong Regionally restricted euxassay_003023_10
TS23: stomach Strong Regionally restricted euxassay_003023_10
TS23: midgut Strong Regionally restricted euxassay_003023_10
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_10
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_10
Specimen euxassay_003023_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_003023_11
TS23: renal calyx Strong Regionally restricted euxassay_003023_11
TS23: midgut Strong Regionally restricted euxassay_003023_11
TS23: stomach Strong Regionally restricted euxassay_003023_11
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_11
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_11
TS23: pancreas Strong Regionally restricted euxassay_003023_11
Specimen euxassay_003023_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_12
TS23: renal calyx Strong Regionally restricted euxassay_003023_12
TS23: midgut Moderate Regionally restricted euxassay_003023_12
TS23: stomach Moderate Regionally restricted euxassay_003023_12
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_12
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_12
TS23: pancreas Strong Regionally restricted euxassay_003023_12
Specimen euxassay_003023_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_13
TS23: renal calyx Strong Regionally restricted euxassay_003023_13
TS23: midgut Strong Regionally restricted euxassay_003023_13
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_13
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_13
TS23: pancreas Strong Regionally restricted euxassay_003023_13
Specimen euxassay_003023_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_14
TS23: midgut Moderate Regionally restricted euxassay_003023_14
TS23: pancreas Strong Regionally restricted euxassay_003023_14
TS23: ventral grey horn Strong Regionally restricted euxassay_003023_14
TS23: pons ventricular layer Strong Regionally restricted euxassay_003023_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003023_14
Specimen euxassay_003023_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_15
TS23: midgut Moderate Regionally restricted euxassay_003023_15
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_15
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_15
TS23: pancreas Strong Regionally restricted euxassay_003023_15
TS23: ventral grey horn Strong Regionally restricted euxassay_003023_15
Specimen euxassay_003023_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_16
TS23: midgut Moderate Regionally restricted euxassay_003023_16
TS23: hindgut Moderate Regionally restricted euxassay_003023_16
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_16
TS23: ventral grey horn Strong Regionally restricted euxassay_003023_16
Specimen euxassay_003023_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_17
TS23: midgut Strong Regionally restricted euxassay_003023_17
TS23: hindgut Strong Regionally restricted euxassay_003023_17
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_17
TS23: ventral grey horn Strong Regionally restricted euxassay_003023_17
Specimen euxassay_003023_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_18
TS23: midgut Strong Regionally restricted euxassay_003023_18
TS23: hindgut Strong Regionally restricted euxassay_003023_18
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_18
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_18
TS23: pancreas Strong Regionally restricted euxassay_003023_18
Specimen euxassay_003023_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_19
TS23: midgut Strong Regionally restricted euxassay_003023_19
TS23: hindgut Strong Regionally restricted euxassay_003023_19
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_19
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003023_19
TS23: pancreas Moderate Regionally restricted euxassay_003023_19
Specimen euxassay_003023_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_20
TS23: renal calyx Moderate Regionally restricted euxassay_003023_20
TS23: midgut Moderate Regionally restricted euxassay_003023_20
TS23: hindgut Moderate Regionally restricted euxassay_003023_20
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003023_20
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003023_20
TS23: pancreas Moderate Regionally restricted euxassay_003023_20
Specimen euxassay_003023_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_21
TS23: renal calyx Strong Regionally restricted euxassay_003023_21
TS23: midgut Moderate Regionally restricted euxassay_003023_21
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003023_21
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003023_21
Specimen euxassay_003023_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_22
TS23: renal calyx Strong Regionally restricted euxassay_003023_22
TS23: midgut Moderate Regionally restricted euxassay_003023_22
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003023_22
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003023_22
Specimen euxassay_003023_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_23
TS23: renal calyx Strong Regionally restricted euxassay_003023_23
TS23: midgut Moderate Regionally restricted euxassay_003023_23
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_003023_23
Specimen euxassay_003023_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_003023_24
TS23: renal calyx Strong Regionally restricted euxassay_003023_24
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_003023_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory