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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825340
Gene symbol: Hdac4
Gene name: histone deacetylase 4
Probe: MGC clone 91339
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006864_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006864_01
TS23: facial ganglion Strong Regionally restricted euxassay_006864_01
Specimen euxassay_006864_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006864_02
TS23: facial ganglion Strong Regionally restricted euxassay_006864_02
TS23: vibrissa Strong Regionally restricted euxassay_006864_02
Specimen euxassay_006864_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006864_03
TS23: vibrissa Strong Regionally restricted euxassay_006864_03
Specimen euxassay_006864_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006864_04
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006864_04
TS23: vibrissa Strong Regionally restricted euxassay_006864_04
Specimen euxassay_006864_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006864_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006864_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_05
TS23: vibrissa Strong Regionally restricted euxassay_006864_05
Specimen euxassay_006864_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Moderate Regionally restricted euxassay_006864_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_06
TS23: vibrissa Strong Regionally restricted euxassay_006864_06
Specimen euxassay_006864_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_07
TS23: vibrissa Strong Regionally restricted euxassay_006864_07
TS23: cervical ganglion Weak Regionally restricted euxassay_006864_07
Specimen euxassay_006864_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_08
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_006864_08
Specimen euxassay_006864_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_09
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_006864_09
TS23: thymus primordium Strong Regionally restricted euxassay_006864_09
TS23: thyroid gland Moderate Regionally restricted euxassay_006864_09
Specimen euxassay_006864_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_10
TS23: thymus primordium Strong Regionally restricted euxassay_006864_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006864_10
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006864_10
Specimen euxassay_006864_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_11
TS23: thymus primordium Strong Regionally restricted euxassay_006864_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006864_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006864_11
Specimen euxassay_006864_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_006864_12
Specimen euxassay_006864_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_006864_13
Specimen euxassay_006864_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_14
TS23: thymus primordium Strong Regionally restricted euxassay_006864_14
TS23: thyroid gland Moderate Regionally restricted euxassay_006864_14
Specimen euxassay_006864_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_15
TS23: cervical ganglion Weak Regionally restricted euxassay_006864_15
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_006864_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006864_15
Specimen euxassay_006864_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Moderate Regionally restricted euxassay_006864_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006864_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006864_16
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006864_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006864_16
Specimen euxassay_006864_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006864_17
Specimen euxassay_006864_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006864_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_18
Specimen euxassay_006864_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_19
TS23: facial ganglion Moderate Regionally restricted euxassay_006864_19
TS23: vibrissa Strong Regionally restricted euxassay_006864_19
Specimen euxassay_006864_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_20
TS23: vibrissa Strong Regionally restricted euxassay_006864_20
Specimen euxassay_006864_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006864_21
TS23: vibrissa Moderate Regionally restricted euxassay_006864_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory