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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825003
Gene symbol: Gata3
Gene name: GATA binding protein 3
Probe: MGC clone 85992
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006921_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_01
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_01
TS23: inner ear Strong Regionally restricted euxassay_006921_01
Specimen euxassay_006921_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_02
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_02
TS23: inner ear Strong Regionally restricted euxassay_006921_02
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_02
Specimen euxassay_006921_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: urinary system Strong Spotted euxassay_006921_03
TS23: mesonephros Present euxassay_006921_03
TS23: skin Strong Regionally restricted euxassay_006921_03
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_03
TS23: inner ear Strong Regionally restricted euxassay_006921_03
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_03
Specimen euxassay_006921_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: urinary system Strong Spotted euxassay_006921_04
TS23: mesonephros Present euxassay_006921_04
TS23: skin Strong Regionally restricted euxassay_006921_04
TS23: vibrissa Strong Regionally restricted euxassay_006921_04
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_04
TS23: inner ear Strong Regionally restricted euxassay_006921_04
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_04
Specimen euxassay_006921_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: urinary system Strong Spotted euxassay_006921_05
TS23: mesonephros Present euxassay_006921_05
TS23: skin Strong Regionally restricted euxassay_006921_05
TS23: vibrissa Strong Regionally restricted euxassay_006921_05
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_05
TS23: inner ear Strong Regionally restricted euxassay_006921_05
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_05
Specimen euxassay_006921_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: urinary system Strong Spotted euxassay_006921_06
TS23: mesonephros Present euxassay_006921_06
TS23: renal calyx Strong Regionally restricted euxassay_006921_06
TS23: skin Strong Regionally restricted euxassay_006921_06
TS23: vibrissa Strong Regionally restricted euxassay_006921_06
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_06
TS23: inner ear Strong Regionally restricted euxassay_006921_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_06
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_06
Specimen euxassay_006921_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_07
TS23: urinary system Strong Spotted euxassay_006921_07
TS23: mesonephros Present euxassay_006921_07
TS23: skin Strong Regionally restricted euxassay_006921_07
TS23: vibrissa Strong Regionally restricted euxassay_006921_07
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_07
TS23: inner ear Strong Regionally restricted euxassay_006921_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_07
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_07
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_07
Specimen euxassay_006921_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_08
TS23: renal calyx Strong Regionally restricted euxassay_006921_08
TS23: vibrissa Strong Regionally restricted euxassay_006921_08
TS23: skin Strong Regionally restricted euxassay_006921_08
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_08
TS23: inner ear Strong Regionally restricted euxassay_006921_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_08
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_08
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_08
Specimen euxassay_006921_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_09
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_09
TS23: skin Strong Regionally restricted euxassay_006921_09
TS23: vibrissa Strong Regionally restricted euxassay_006921_09
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_09
TS23: cervical ganglion Strong Regionally restricted euxassay_006921_09
TS23: inner ear Strong Regionally restricted euxassay_006921_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_09
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_09
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_09
Specimen euxassay_006921_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_10
TS23: renal calyx Strong Regionally restricted euxassay_006921_10
TS23: skin Strong Regionally restricted euxassay_006921_10
TS23: vibrissa Strong Regionally restricted euxassay_006921_10
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_10
TS23: cervical ganglion Strong Regionally restricted euxassay_006921_10
TS23: inner ear Strong Regionally restricted euxassay_006921_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_10
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_10
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_10
Specimen euxassay_006921_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_11
TS23: renal calyx Strong Regionally restricted euxassay_006921_11
TS23: skin Strong Regionally restricted euxassay_006921_11
TS23: vibrissa Strong Regionally restricted euxassay_006921_11
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_11
TS23: thymus primordium Moderate Regionally restricted euxassay_006921_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_11
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_11
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_11
Specimen euxassay_006921_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_12
TS23: thoracic ganglion Strong Regionally restricted euxassay_006921_12
TS23: thymus primordium Moderate Regionally restricted euxassay_006921_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_12
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_12
TS23: larynx Moderate Regionally restricted euxassay_006921_12
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_12
Specimen euxassay_006921_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_13
TS23: thoracic ganglion Strong Regionally restricted euxassay_006921_13
TS23: thymus primordium Moderate Regionally restricted euxassay_006921_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_13
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_13
TS23: larynx Strong Regionally restricted euxassay_006921_13
TS23: nasal cavity Strong Regionally restricted euxassay_006921_13
Specimen euxassay_006921_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_14
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_14
TS23: thoracic ganglion Strong Regionally restricted euxassay_006921_14
TS23: thymus primordium Moderate Regionally restricted euxassay_006921_14
TS23: bladder Strong Regionally restricted euxassay_006921_14
TS23: urethra Strong Regionally restricted euxassay_006921_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_14
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_14
TS23: larynx Strong Regionally restricted euxassay_006921_14
TS23: nasal cavity Strong Regionally restricted euxassay_006921_14
Specimen euxassay_006921_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_15
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_15
TS23: thoracic ganglion Strong Regionally restricted euxassay_006921_15
TS23: thymus primordium Moderate Regionally restricted euxassay_006921_15
TS23: bladder Strong Regionally restricted euxassay_006921_15
TS23: urethra Strong Regionally restricted euxassay_006921_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_15
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_15
TS23: larynx Strong Regionally restricted euxassay_006921_15
TS23: nasal cavity Strong Regionally restricted euxassay_006921_15
Specimen euxassay_006921_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_16
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_16
TS23: skin Strong Regionally restricted euxassay_006921_16
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_16
TS23: thymus primordium Moderate Regionally restricted euxassay_006921_16
TS23: urethra Strong Regionally restricted euxassay_006921_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_16
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006921_16
TS23: larynx Moderate Regionally restricted euxassay_006921_16
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_16
Specimen euxassay_006921_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_17
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_17
TS23: skin Strong Regionally restricted euxassay_006921_17
TS23: cervical ganglion Strong Regionally restricted euxassay_006921_17
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_006921_17
TS23: inner ear Strong Regionally restricted euxassay_006921_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_17
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_006921_17
TS23: nasal cavity Strong Regionally restricted euxassay_006921_17
Specimen euxassay_006921_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_18
TS23: adrenal medulla Strong Regionally restricted euxassay_006921_18
TS23: skin Strong Regionally restricted euxassay_006921_18
TS23: cervical ganglion Strong Regionally restricted euxassay_006921_18
TS23: inner ear Strong Regionally restricted euxassay_006921_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_18
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_18
TS23: nasal cavity Strong Regionally restricted euxassay_006921_18
Specimen euxassay_006921_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_19
TS23: skin Strong Regionally restricted euxassay_006921_19
TS23: inner ear Strong Regionally restricted euxassay_006921_19
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_19
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_19
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_19
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_19
Specimen euxassay_006921_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_20
TS23: urinary system Strong Spotted euxassay_006921_20
TS23: mesonephros Present euxassay_006921_20
TS23: skin Strong Regionally restricted euxassay_006921_20
TS23: inner ear Strong Regionally restricted euxassay_006921_20
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_20
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_20
TS23: pons mantle layer Strong Regionally restricted euxassay_006921_20
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_20
Specimen euxassay_006921_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal calyx Strong Regionally restricted euxassay_006921_21
TS23: urinary system Strong Spotted euxassay_006921_21
TS23: mesonephros Present euxassay_006921_21
TS23: skin Strong Regionally restricted euxassay_006921_21
TS23: inner ear Strong Regionally restricted euxassay_006921_21
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_21
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006921_21
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006921_21
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_21
Specimen euxassay_006921_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: urinary system Strong Spotted euxassay_006921_22
TS23: mesonephros Present euxassay_006921_22
TS23: skin Strong Regionally restricted euxassay_006921_22
TS23: vibrissa Strong Regionally restricted euxassay_006921_22
TS23: inner ear Strong Regionally restricted euxassay_006921_22
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_22
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_22
Specimen euxassay_006921_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: urinary system Strong Spotted euxassay_006921_23
TS23: mesonephros Present euxassay_006921_23
TS23: skin Strong Regionally restricted euxassay_006921_23
TS23: vibrissa Strong Regionally restricted euxassay_006921_23
TS23: inner ear Strong Regionally restricted euxassay_006921_23
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006921_23
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_23
TS23: nasal cavity Moderate Regionally restricted euxassay_006921_23
Specimen euxassay_006921_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: skin Strong Regionally restricted euxassay_006921_24
TS23: vibrissa Strong Regionally restricted euxassay_006921_24
TS23: perioptic mesenchyme Strong Regionally restricted euxassay_006921_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory