About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824989
Gene symbol: Galntl6
Gene name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
Probe: T38167
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013046_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_04
Specimen euxassay_013046_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_05
Specimen euxassay_013046_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_06
Specimen euxassay_013046_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_07
Specimen euxassay_013046_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013046_09
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_013046_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_09
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_09
Specimen euxassay_013046_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013046_10
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_013046_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013046_10
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_10
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_10
Specimen euxassay_013046_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013046_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_11
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_11
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_11
Specimen euxassay_013046_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_12
Specimen euxassay_013046_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_13
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_13
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_13
Specimen euxassay_013046_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013046_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_14
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_14
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_14
Specimen euxassay_013046_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_013046_15
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_013046_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_15
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_15
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_15
Specimen euxassay_013046_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_16
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_013046_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_013046_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013046_16
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_16
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_16
Specimen euxassay_013046_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_17
TS23: thalamus mantle layer Weak Regionally restricted euxassay_013046_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013046_17
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013046_17
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013046_17
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_17
Specimen euxassay_013046_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013046_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013046_18
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_18
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_013046_18
Specimen euxassay_013046_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_19
TS23: pons mantle layer Weak Regionally restricted euxassay_013046_19
Specimen euxassay_013046_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_20
Specimen euxassay_013046_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_21
Specimen euxassay_013046_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013046_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/30/2025
MGI 6.24 		The Jackson Laboratory